RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 ADAMTS18Q8TE60 1221 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PTPMT1Q8WUK0 201 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 TANKQ92844 425 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 TSSK3Q96PN8 268 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 EFHD1Q9BUP0 239 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 C1orf50Q9BV19 199 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 ALOXE3Q9BYJ1 711 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 SLAMF7Q9NQ25 335 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 P4HTMQ9NXG6 502 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 ZNF223Q9UK11 482 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PPIEQ9UNP9 301 aaKnown RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 PADI2Q9Y2J8 665 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
NEDD8-205ENST00000527046 TMED5Q9Y3A6 229 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 GPR45Q9Y5Y3 372 aa10.09□□□□□ -0.79
NEDD8-205ENST00000527046 CDC14CA4D256 554 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF891A8MT65 544 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-205ENST00000527046 TBX19O60806 448 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 SCN2BO60939 215 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 IGHEP01854 428 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 CLPSP04118 112 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 CELA2AP08217 269 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 C8orf89P0DMQ9 161 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 NR2F6P10588 404 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 DRD2P14416 443 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 LBPP18428 481 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 DDCP20711 480 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 S1PR1P21453 382 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 JAK1P23458 1154 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 OTX2P32243 289 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 CLDN8P56748 225 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 C21orf58P58505 322 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ERVK-8P63133 956 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF763Q0D2J5 394 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ATP1A4Q13733 1029 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 NSDHLQ15738 373 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 LINC00303Q3SY05 128 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ATP6AP1LQ52LC2 224 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 LRRC69Q6ZNQ3 347 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 CPEB2Q7Z5Q1 589 aaKnown RBP10.08□□□□□ -0.8
NEDD8-205ENST00000527046 KIRREL3Q8IZU9 778 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF321PQ8N8H1 164 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 SIMC1Q8NDZ2 872 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 CLHC1Q8NHS4 586 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 SUN3Q8TAQ9 357 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 DOK4Q8TEW6 326 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 STON2Q8WXE9 905 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 PSMF1Q92530 271 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 PPWD1Q96BP3 646 aaKnown RBP10.08□□□□□ -0.8
NEDD8-205ENST00000527046 COQ8BQ96D53 544 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 TRIM4Q9C037 500 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF700Q9H0M5 742 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 SLC52A3Q9NQ40 469 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 RIC8BQ9NVN3 520 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 AIG1Q9NVV5 245 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 ATP6V1HQ9UI12 483 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 KCNMB2Q9Y691 235 aa10.08□□□□□ -0.8
NEDD8-205ENST00000527046 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 BLACEA4D250 179 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 MYO1GB0I1T2 1018 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 HRKO00198 91 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 CLDN4O14493 209 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 VPS4BO75351 444 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 DDAH2O95865 285 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 CT62P0C5K7 136 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 PRKAR1AP10644 381 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 PRPS2P11908 318 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 LSP1P33241 339 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 PTGER1P34995 402 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 BUD31P41223 144 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 FRKP42685 505 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 GSTM5P46439 218 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 WNT3P56703 355 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 SOX8P57073 446 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 EEF1A2Q05639 463 aaKnown RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 SLC13A2Q13183 592 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 SFT2D3Q587I9 215 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 ANKRD26P1Q6NSI1 321 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 C19orf48Q6RUI8 117 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 PCSK4Q6UW60 755 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 TICAM1Q8IUC6 712 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 GFM2Q969S9 779 aaKnown RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 CTHRC1Q96CG8 243 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF764Q96H86 408 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-205ENST00000527046 CCDC28BQ9BUN5 200 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 BRINP2Q9C0B6 783 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 ZNF385DQ9H6B1 395 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 EHD3Q9NZN3 535 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 FBXL4Q9UKA2 621 aa10.07□□□□□ -0.8
NEDD8-205ENST00000527046 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 A8MUA0 341 aa10.06□□□□□ -0.8
NEDD8-205ENST00000527046 POLR3GO15318 223 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-205ENST00000527046 AKAP10O43572 662 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms