RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
USH1C-205ENST00000527020 TRBV4-1A0A0J9YWV2 114 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 LATO43561 262 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 BMP4P12644 408 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 TRIM23P36406 574 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 AGERQ15109 404 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 SLC44A2Q8IWA5 706 aaPredicted RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 DEPDC4Q8N2C3 294 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 CREB3L4Q8TEY5 395 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 RGMAQ96B86 450 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 QRFPRQ96P65 431 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 WFDC6Q9BQY6 131 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 PLA2G2FQ9BZM2 168 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 WDR12Q9GZL7 423 aaKnown RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 PITHD1Q9GZP4 211 aaPredicted RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 RSPH9Q9H1X1 276 aaPredicted RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 DDX31Q9H8H2 851 aaKnown RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 DNAAF2Q9NVR5 837 aaKnown RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 PNMA8BQ9ULN7 279 aaPredicted RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 ZFR2Q9UPR6 939 aaKnown RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 DSPPQ9NZW4 1301 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 A0A0G2JN53 185 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 ZAR1LA6NP61 321 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 EFCAB9A8MZ26 197 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 ADRA2AP08913 450 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 ACP5P13686 325 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 CHMP24386 653 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 GRK3P35626 688 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 DMPKQ09013 629 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 IRF3Q14653 427 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 DUSP6Q16828 381 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 RGS21Q2M5E4 152 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 PSMA8Q8TAA3 256 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 C12orf66Q96MD2 445 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 FERD3LQ96RJ6 166 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 XKR8Q9H6D3 395 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 WDR26Q9H7D7 661 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 SFXN1Q9H9B4 322 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 GDE1Q9NZC3 331 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 ACSL5Q9ULC5 683 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 DUSP12Q9UNI6 340 aa16.68■□□□□ 0.26
USH1C-205ENST00000527020 MDC1Q14676 2089 aaKnown RBP16.68■□□□□ 0.26
USH1C-205ENST00000527020 A0A0A6YYD5 115 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 C5orf58C9J3I9 102 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 CD72P21854 359 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 GRK5P34947 590 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 IFITM3Q01628 133 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 TIGD6Q17RP2 521 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ADCK1Q86TW2 530 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 OR4D11Q8NGI4 311 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 OR2A1Q8NGT9 310 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 KLK6Q92876 244 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ADAM29Q9UKF5 820 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 GOLGA4Q13439 2230 aaKnown RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 A0A1W2PP55 124 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 WASHC1A8K0Z3 465 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 PTHP01270 115 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ADORA3P0DMS8 318 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 GADD45AP24522 165 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 CTSKP43235 329 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 PRDX1Q06830 199 aaKnown RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 ENPP2Q13822 863 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 SEC23BQ15437 767 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 FRMPD2BQ6IN97 320 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 TCTN3Q6NUS6 607 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 WASH2PQ6VEQ5 465 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 SLC46A3Q7Z3Q1 461 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 UBE2Q1Q7Z7E8 422 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 RBM45Q8IUH3 476 aaKnown RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 FAM20CQ8IXL6 584 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 S100ZQ8WXG8 99 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ZBED6CLQ96FA7 236 aaPredicted RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 CAMK1GQ96NX5 476 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 MAPKAP1Q9BPZ7 522 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ZBTB20Q9HC78 741 aaPredicted RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 ACSS1Q9NUB1 689 aaPredicted RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 IMPAD1Q9NX62 359 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 MS4A12Q9NXJ0 267 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.67■□□□□ 0.26
USH1C-205ENST00000527020 PLEKHM1Q9Y4G2 1056 aa16.67■□□□□ 0.26
USH1C-205ENST00000527020 GPR89AB7ZAQ6 455 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 C4orf51C9J302 202 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 CLEC3AO75596 197 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 HNRNPCP07910 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
USH1C-205ENST00000527020 GPR89BP0CG08 455 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 SERPINB10P48595 397 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 CCT3P49368 545 aaKnown RBP16.66■□□□□ 0.26
USH1C-205ENST00000527020 DGKEP52429 567 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 CRISP1P54107 249 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 ST3GAL4Q11206 333 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 OR4C11Q6IEV9 310 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 HDDC3Q8N4P3 179 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 B3GNT7Q8NFL0 401 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 ZNF675Q8TD23 568 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 ZHX1-C8orf76Q96EF9 292 aa16.66■□□□□ 0.26
USH1C-205ENST00000527020 DHRS1Q96LJ7 313 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms