RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GRK3P35626 688 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 PIK3CBP42338 1070 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 OR1D4P47884 311 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 MEOX1P50221 254 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 PKNOX1P55347 436 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 NAA20P61599 178 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 BST1Q10588 318 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DSG2Q14126 1118 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 FAM53BQ14153 422 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 RCN2Q14257 317 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 SLC9A5Q14940 896 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 ABRAXAS2Q15018 415 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 CHI3L2Q15782 390 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 RBBP7Q16576 425 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DEPDC1Q5TB30 811 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 C1orf189Q5VU69 101 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 YOD1Q5VVQ6 348 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-204ENST00000526430 FRG2Q64ET8 278 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 TTLL10Q6ZVT0 673 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 SPPL2CQ8IUH8 684 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DMRTC2Q8IXT2 367 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-204ENST00000526430 CAMKVQ8NCB2 501 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 TRPV3Q8NET8 790 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 OR11G2Q8NGC1 345 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 MGARPQ8TDB4 240 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 NUDT8Q8WV74 236 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 ATP6V1E2Q96A05 226 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 C11orf24Q96F05 449 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-204ENST00000526430 FRG2BQ96QU4 278 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DMRTA2Q96SC8 542 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 MTERF1Q99551 399 aaKnown RBP10.23□□□□□ -0.77
NEDD8-204ENST00000526430 SMR3AQ99954 134 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 RNF32Q9H0A6 362 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 SLC26A1Q9H2B4 701 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 OR51B5Q9H339 312 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DMRT3Q9NQL9 472 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 NPDC1Q9NQX5 325 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-204ENST00000526430 FAM53CQ9NYF3 392 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 PPT2Q9UMR5 302 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 PCDHGA11Q9Y5H2 935 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 DNAJC15Q9Y5T4 150 aa10.23□□□□□ -0.77
NEDD8-204ENST00000526430 A0A0A6YYC8 382 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 FAM171A2A8MVW0 826 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 E9PLN8 166 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 I3L1I5 382 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 RTCAO00442 366 aaKnown RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TXNDC9O14530 226 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 NDUFS4O43181 175 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 GALR3O60755 368 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SH3BGRLO75368 114 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 HPP00738 406 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ALBP02768 609 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 INHBBP09529 407 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF888P0CJ79 500 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 GSTM2P28161 218 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ARSFP54793 590 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 RAB8AP61006 207 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 RPS13P62277 151 aaKnown RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TFF3Q07654 80 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TBL3Q12788 808 aaKnown RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 RUNX2Q13950 521 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 HIST2H2ACQ16777 129 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SYT16Q17RD7 645 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 FAM214AQ32MH5 1076 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 KRTCAP3Q53RY4 240 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 PAGE2BQ5JRK9 111 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TOR1AIP1Q5JTV8 583 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 HHATQ5VTY9 493 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 GARNL3Q5VVW2 1013 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 KANK2Q63ZY3 851 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 CLEC6AQ6EIG7 209 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 HIST2H2AA3Q6FI13 130 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ABHD17CQ6PCB6 329 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SCIMPQ6UWF3 145 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 CLEC9AQ6UXN8 241 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF793Q6ZN11 406 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 Q6ZSR9 355 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 EID3Q8N140 333 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 OR9A4Q8NGU2 314 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 METTL6Q8TCB7 284 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 ZNF75CPQ92670 426 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 RERGQ96A58 199 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SDCCAG3Q96C92 435 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 MBD6Q96DN6 1003 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 HBEGFQ99075 208 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SPSB2Q99619 263 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 VKORC1Q9BQB6 163 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TRMOQ9BU70 441 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 SORBS1Q9BX66 1292 aaKnown RBP10.22□□□□□ -0.77
NEDD8-204ENST00000526430 TXLNGQ9NUQ3 528 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 COQ3Q9NZJ6 369 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 KCMF1Q9P0J7 381 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 EDARQ9UNE0 448 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 PTGDR2Q9Y5Y4 395 aa10.22□□□□□ -0.77
NEDD8-204ENST00000526430 IGLV3-12A0A075B6K2 115 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 A0A0G2JN53 185 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 A0A1B0GX78 115 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 ANKDD1BA6NHY2 528 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 VSTM2BA6NLU5 285 aa10.21□□□□□ -0.77
NEDD8-204ENST00000526430 TMEM114B3SHH9 223 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms