RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 NXNQ6DKJ4 435 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 CPEB2Q7Z5Q1 589 aaKnown RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ANKRD37Q7Z713 158 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 CLNKQ7Z7G1 428 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 OR4K14Q8NGD5 310 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 FER1L6-AS2Q96M78 137 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ZNF317Q96PQ6 595 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 WDR55Q9H6Y2 383 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 NPHS2Q9NP85 383 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ADAP2Q9NPF8 381 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 MAP1BP46821 2468 aaKnown RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 GOLGA8QA0A0J9YX86 632 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 GOLGA8OA6NCC3 632 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 GOLGA8NF8WBI6 632 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 SOCS6O14544 535 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 FGF17O60258 216 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TBX19O60806 448 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 LDB3O75112 727 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 COX7A2P14406 83 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 IDO1P14902 403 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ITPKBP27987 946 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 C21orf58P58505 322 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ELAVL1Q15717 326 aaKnown RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 FAM69BQ5VUD6 431 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TMEM102Q8N9M5 508 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TSLPQ969D9 159 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 CNTNAP3BQ96NU0 1288 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TSSK3Q96PN8 268 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 LPAR4Q99677 370 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TUBB6Q9BUF5 446 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 CNTNAP3Q9BZ76 1288 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 NECTIN3Q9NQS3 549 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 P4HTMQ9NXG6 502 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 TAS2R7Q9NYW3 318 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 ZNF780BQ9Y6R6 833 aa17.55■□□□□ 0.4
PTPRK-218ENST00000525459 DYRK3O43781 588 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 HPP00738 406 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 PRPS1L1P21108 318 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 TACR1P25103 407 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 LSP1P33241 339 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 GALNSP34059 522 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 IDH3AP50213 366 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 EFNA3P52797 238 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 FOXL2P58012 376 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 OR4D2P58180 307 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 GSTA3Q16772 222 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 FAAH2Q6GMR7 532 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 KIRREL2Q6UWL6 708 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
PTPRK-218ENST00000525459 SHISA5Q8N114 240 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 NATD1Q8N6N6 113 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 OR11G2Q8NGC1 345 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 ANKRD9Q96BM1 317 aaPredicted RBP17.54■□□□□ 0.4
PTPRK-218ENST00000525459 KLHL29Q96CT2 875 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 ALOXE3Q9BYJ1 711 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 ZNF700Q9H0M5 742 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 REEP4Q9H6H4 257 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 MRGBPQ9NV56 204 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 UTS2RQ9UKP6 389 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 CES1P1Q9UKY3 287 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 ENTPD4Q9Y227 616 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 MAN2B2Q9Y2E5 1009 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 CLDN16Q9Y5I7 305 aa17.54■□□□□ 0.4
PTPRK-218ENST00000525459 IGHV1-45A0A0A0MS14 117 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 GLOD5A6NK44 160 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 SRRM3A6NNA2 597 aaPredicted RBP17.53■□□□□ 0.4
PTPRK-218ENST00000525459 NKX2-8O15522 239 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 PRKRAO75569 313 aaKnown RBP17.53■□□□□ 0.4
PTPRK-218ENST00000525459 PRKAR1AP10644 381 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 STT3AP46977 705 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 ATP1A4Q13733 1029 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 PDE7AQ13946 482 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 DPY19L1Q2PZI1 675 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 LSM12Q3MHD2 195 aaKnown RBP17.53■□□□□ 0.4
PTPRK-218ENST00000525459 LANCL3Q6ZV70 420 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 NDUFAF7Q7L592 441 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 DGAT2Q96PD7 388 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 PRPF18Q99633 342 aaKnown RBP17.53■□□□□ 0.4
PTPRK-218ENST00000525459 BRINP2Q9C0B6 783 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 ATAD3AQ9NVI7 634 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 AIG1Q9NVV5 245 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 KLHL14Q9P2G3 628 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 HEY2Q9UBP5 337 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 TRIM33Q9UPN9 1127 aa17.53■□□□□ 0.4
PTPRK-218ENST00000525459 NSG1A0A0A6YYJ2 146 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 PGRMC2O15173 223 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 UBDO15205 165 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 FURINP09958 794 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 SLC35E2P0CK97 266 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 G6PDP11413 515 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 COX6A1P12074 109 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 ICAM2P13598 275 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 CSNK2A2P19784 350 aaPredicted RBP17.52■□□□□ 0.4
PTPRK-218ENST00000525459 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
PTPRK-218ENST00000525459 CLDN8P56748 225 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 PTGR1Q14914 329 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 CEBPEQ15744 281 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 EXT1Q16394 746 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 SFT2D3Q587I9 215 aa17.52■□□□□ 0.4
PTPRK-218ENST00000525459 CLEC1AQ8NC01 280 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms