RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IL20RBQ6UXL0 311 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 TRMT10CQ7L0Y3 403 aaKnown RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 MDGA2Q7Z553 956 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 SIAH3Q8IW03 269 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 SULF2Q8IWU5 870 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 C7orf57Q8NEG2 295 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 WDR20Q8TBZ3 569 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 PPWD1Q96BP3 646 aaKnown RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 SERPINI1Q99574 410 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 MRPL46Q9H2W6 279 aaKnown RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 SEMA4BQ9NPR2 832 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 HPF1Q9NWY4 346 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 LYARQ9NX58 379 aaKnown RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 FOXE1O00358 373 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 PROM1O43490 865 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 DYRK3O43781 588 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 PEX1O43933 1283 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 GBAP04062 536 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 ABHD2P08910 425 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 FAM58BPP0C7Q3 252 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 ESRRAP11474 423 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 BSGP35613 385 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 DCTP40126 519 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 STT3AP46977 705 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 GPR85P60893 370 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 RNF4P78317 190 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 PLIN5Q00G26 463 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 FOLH1Q04609 750 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 IFT88Q13099 833 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 C3AR1Q16581 482 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 SGO1Q5FBB7 561 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 SPPL2CQ8IUH8 684 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 GHDCQ8N2G8 530 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 POGLUT1Q8NBL1 392 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 OR5L2Q8NGL0 311 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 CCDC120Q96HB5 630 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 SENP5Q96HI0 755 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 RASL10BQ96S79 203 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF717Q9BY31 904 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 DDX31Q9H8H2 851 aaKnown RBP17.23■□□□□ 0.35
CAPN1-203ENST00000525013 WDR41Q9HAD4 459 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 ZBTB26Q9HCK0 441 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 TINAGQ9UJW2 476 aa17.23■□□□□ 0.35
CAPN1-203ENST00000525013 A0A0A6YYD5 115 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 GLOD5A6NK44 160 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 ZNHIT1O43257 154 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 RIPK2O43353 540 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 TMPRSS11DO60235 418 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 OR6B1O95007 311 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 NR2F6P10588 404 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 ABOP16442 354 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 SOX3P41225 446 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 HK2P52789 917 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 IGLV3-21P80748 117 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-203ENST00000525013 HSF1Q00613 529 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 TRAF3Q13114 568 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 BIKQ13323 160 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 FRG2Q64ET8 278 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 MTFR2Q6P444 385 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 MILR1Q7Z6M3 343 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 NUDT13Q86X67 352 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 GPALPP1Q8IXQ4 340 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 DOK4Q8TEW6 326 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF721Q8TF20 911 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 FRG2BQ96QU4 278 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 NTMT1Q9BV86 223 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 PSD3Q9NYI0 1048 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 ASB4Q9Y574 426 aa17.22■□□□□ 0.35
CAPN1-203ENST00000525013 A0A1W2PR48 441 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 WASHC1A8K0Z3 465 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 OR10H2O60403 315 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 GPR75O95800 540 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 FAM153BP0C7A2 387 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 ALOX15P16050 662 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-203ENST00000525013 TSPAN8P19075 237 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 GCAP28676 217 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 CDH13P55290 713 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 FAM153CQ494X1 144 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 MRM1Q6IN84 353 aaKnown RBP17.21■□□□□ 0.35
CAPN1-203ENST00000525013 DGAT2L6Q6ZPD8 337 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 PSD4Q8NDX1 1056 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 OR4F6Q8NGB9 312 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 OR8K3Q8NH51 312 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 MTBPQ96DY7 904 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 ELOVL6Q9H5J4 265 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 AHSPQ9NZD4 102 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 PPT2Q9UMR5 302 aa17.21■□□□□ 0.35
CAPN1-203ENST00000525013 A8MT66 165 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 HRKO00198 91 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 HS6ST1O60243 411 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 CDC40O60508 579 aaKnown RBP eCLIP17.2■□□□□ 0.34
CAPN1-203ENST00000525013 SEMA3DO95025 777 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 AIFM1O95831 613 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 OTCP00480 354 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 RPS17P08708 135 aaKnown RBP17.2■□□□□ 0.34
CAPN1-203ENST00000525013 TAC1P20366 129 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 PTGER1P34995 402 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms