RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 DGCR6Q14129 220 aa16.31■□□□□ 0.2
BEST1-203ENST00000524877 AKAP1Q92667 903 aaKnown RBP eCLIP16.31■□□□□ 0.2
BEST1-203ENST00000524877 SH3YL1Q96HL8 342 aaPredicted RBP16.31■□□□□ 0.2
BEST1-203ENST00000524877 QPCTLQ9NXS2 382 aa16.31■□□□□ 0.2
BEST1-203ENST00000524877 PRSS56P0CW18 603 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 DBTP11182 482 aaKnown RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 RAET1LQ5VY80 246 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 BBS10Q8TAM1 723 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 TMEM5Q9Y2B1 443 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 MAZP56270 477 aaKnown RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 GMFBP60983 142 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 TCEAL6Q6IPX3 200 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 AAGABQ6PD74 315 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 SVOPLQ8N434 492 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 OR8K5Q8NH50 307 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 CDH22Q9UJ99 828 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 CLDN25C9JDP6 229 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 AK1P00568 194 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 LACTB2Q53H82 288 aaPredicted RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 GRHL2Q6ISB3 625 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 ZFAND4Q86XD8 727 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 HUS1BQ8NHY5 278 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 DIO2Q92813 273 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 KCNN1Q92952 543 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 DMRTB1Q96MA1 342 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 NAA11Q9BSU3 229 aaPredicted RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 TMEM233B4DJY2 109 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 HCRTR2O43614 444 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 NUAK1O60285 661 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 S100GP29377 79 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 EIF2S3LQ2VIR3 472 aaKnown RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 CYS1Q717R9 158 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 ZDHHC21Q8IVQ6 265 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 SNIP1Q8TAD8 396 aaKnown RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 EDEM2Q9BV94 578 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 TRIM2Q9C040 744 aa16.3■□□□□ 0.2
BEST1-203ENST00000524877 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
BEST1-203ENST00000524877 PLOD3O60568 738 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 PRAMEF2O60811 474 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 EEFSECP57772 596 aaKnown RBP16.29■□□□□ 0.2
BEST1-203ENST00000524877 PCDH1Q08174 1060 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 CDKL4Q5MAI5 379 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 SMARCD3Q6STE5 483 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 PLET1Q6UQ28 207 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 TMEM168Q9H0V1 697 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 NPIPA2E9PIF3 369 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 NPIPA3F8WFD2 350 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 TIPRLO75663 272 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 SCRG1O75711 98 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 CRYZL1O95825 349 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 CHRM5P08912 532 aaPredicted RBP16.29■□□□□ 0.2
BEST1-203ENST00000524877 TGFBR2P37173 567 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 HK3P52790 923 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 ADPRHP54922 357 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 LOC100506127A0A0U1RQW1 187 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 MYOCOSA0A1B0GUC4 107 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 PPM1BO75688 479 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 ZNF888P0CJ79 500 aaPredicted RBP16.29■□□□□ 0.2
BEST1-203ENST00000524877 CLUP10909 449 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 HOXD12P35452 270 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 RGRP47804 291 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 SELENOVP59797 346 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
BEST1-203ENST00000524877 GALNT5Q7Z7M9 940 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 CEP97Q8IW35 865 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 NKIRAS2Q9NYR9 191 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 LOC110117498-PIK3R3F6TDL0 507 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 ECDO95905 644 aaPredicted RBP16.29■□□□□ 0.2
BEST1-203ENST00000524877 SLC16A8O95907 504 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 YES1P07947 543 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 UFM1P61960 85 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 PCLAFQ15004 111 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 THAP5Q7Z6K1 395 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 RNF130Q86XS8 419 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 DHRS1Q96LJ7 313 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 TWSG1Q9GZX9 223 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 ZNF304Q9HCX3 659 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 SCN9AQ15858 1988 aa16.29■□□□□ 0.2
BEST1-203ENST00000524877 A0A1W2PPC1 479 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 CDC14CA4D256 554 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 E7ESA3 106 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 FOXN2P32314 431 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 LSM3P62310 102 aaKnown RBP16.28■□□□□ 0.2
BEST1-203ENST00000524877 CLPTM1LQ96KA5 538 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 KLHL42Q9P2K6 505 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 MRPS7Q9Y2R9 242 aaKnown RBP16.28■□□□□ 0.2
BEST1-203ENST00000524877 DHFRP00374 187 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 IFNA7P01567 189 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 NCK1P16333 377 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 NAT1P18440 290 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 CTSCP53634 463 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 TMEM44Q2T9K0 475 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 SATL1Q86VE3 508 aa16.28■□□□□ 0.2
BEST1-203ENST00000524877 TMEM151BQ8IW70 566 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms