RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF395Q9H8N7 513 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SRPK3Q9UPE1 567 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 A0A1B0GVT2 93 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 GPR89AB7ZAQ6 455 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 C11orf98E9PRG8 122 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 PLD2O14939 933 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 CER1O95813 267 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 GPR89BP0CG08 455 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 GSCP56915 257 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC7A9P82251 487 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 UGT3A2Q3SY77 523 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 KIAA0895LQ68EN5 471 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 OR6N2Q8NGY6 317 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 LRRC15Q8TF66 581 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ZUFSPQ96AP4 578 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 FRMD6Q96NE9 622 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC22A4Q9H015 551 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ZBTB20Q9HC78 741 aaPredicted RBP15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 ANKMY1Q9P2S6 941 aa15.56■□□□□ 0.08
PCDHA3-201ENST00000522353 E7ESA3 106 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 DCDC1P59894 354 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA3CQ13748 450 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 PTGR1Q14914 329 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 SGCAQ16586 387 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 FTMTQ8N4E7 242 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 OR10Q1Q8NGQ4 319 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 HUS1BQ8NHY5 278 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 AURKBQ96GD4 344 aaPredicted RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TOE1Q96GM8 510 aaKnown RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 PELI2Q9HAT8 420 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 BRF2Q9HAW0 419 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA8Q9NY65 449 aaPredicted RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 LRRC42Q9Y546 428 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 SDK1Q7Z5N4 2213 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 PROM1O43490 865 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 RFPL1O75677 317 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 SOX14O95416 240 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 MRPS21P82921 87 aaKnown RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 ALG10Q5BKT4 473 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 SHQ1Q6PI26 577 aaKnown RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 NPWQ8N729 165 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 BORCS8Q96FH0 119 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 KLF16Q9BXK1 252 aaPredicted RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 OR51I1Q9H343 314 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 GIMAP2Q9UG22 337 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM14AQ9Y6G1 99 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 FEZF1A0PJY2 475 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 L7N2F9 121 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TOR1BO14657 336 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 DIRAS1O95057 198 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 ADORA3P0DMS8 318 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 VAMP2P63027 116 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 GRIK2Q13002 908 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 RCAN2Q14206 197 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 OR8H1Q8NGG4 311 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 OR8K5Q8NH50 307 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 DCSTAMPQ9H295 470 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 A8MVJ9 347 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 C6orf120Q7Z4R8 191 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 OR52P1PQ8NH57 321 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 HPF1Q9NWY4 346 aa15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 TMA7Q9Y2S6 64 aaKnown RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 AHDC1Q5TGY3 1603 aaPredicted RBP15.55■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC2A2P11168 524 aaPredicted RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 CBLP22681 906 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 ARSDP51689 593 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 ARPC4P59998 168 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SHC2P98077 582 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 VMACQ2NL98 169 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC35F1Q5T1Q4 408 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 KIAA1614Q5VZ46 1190 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SCML4Q8N228 414 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 CRYGNQ8WXF5 182 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC12A9Q9BXP2 914 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PCDHGB6Q9Y5F9 930 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 DLG5Q8TDM6 1919 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 GJE1A6NN92 205 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 FAAHO00519 579 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 RPS3P23396 243 aaKnown RBP eCLIP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 DCKP27707 260 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 FOLR3P41439 243 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 RBM34P42696 430 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA1BP68363 451 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA4AP68366 448 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 RPL19P84098 196 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 ZNF33BQ06732 778 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM107Q6UX40 140 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA1AQ71U36 451 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 UBQLNLQ8IYU4 475 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 GALNT15Q8N3T1 639 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 ERMAPQ96PL5 475 aaPredicted RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 CRB3Q9BUF7 120 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PTBP2Q9UKA9 531 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TMPRSS11EQ9UL52 423 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 MYH2Q9UKX2 1941 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TRIM64A6NGJ6 449 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 S100A6P06703 90 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SPARCP09486 303 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC35E2BP0CK96 405 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PDHA2P29803 388 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms