RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 XCR1P46094 333 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 MAPK10P53779 464 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 MANFP55145 182 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 PCBP4P57723 403 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 DSG2Q14126 1118 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ERV3-1Q14264 604 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ARHGAP40Q5TG30 622 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF621Q6ZSS3 439 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 OR4N5Q8IXE1 308 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC38A9Q8NBW4 561 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 OR4K14Q8NGD5 310 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 DNAJB8Q8NHS0 232 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 TANKQ92844 425 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 TBC1D20Q96BZ9 403 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 ZBED6CLQ96FA7 236 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 LIN37Q96GY3 246 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 THTPAQ9BU02 230 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 PAIP1Q9H074 479 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 PRDM9Q9NQV7 894 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 TRPC4Q9UBN4 977 aa20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 MRPS33Q9Y291 106 aaKnown RBP20.13■□□□□ 0.81
R3HCC1-208ENST00000522012 FXYD1O00168 92 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 TM4SF5O14894 197 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 NVLO15381 856 aaKnown RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 PGM1P36871 562 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 GTDC1Q4AE62 458 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 OR5P2Q8WZ92 322 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CNRIP1Q96F85 164 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 GBP5Q96PP8 586 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CDRT15Q96T59 188 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CGREF1Q99674 301 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 SLAMF7Q9NQ25 335 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC6A13Q9NSD5 602 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 MAP4K5Q9Y4K4 846 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 PCDHB14Q9Y5E9 798 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 WDR87Q6ZQQ6 2873 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 LDB3O75112 727 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CDC123O75794 336 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 DKK1O94907 266 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 JMJD7P0C870 316 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CEACAM1P13688 526 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CSNK2A2P19784 350 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ETV5P41161 510 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 NOVA1P51513 510 aaKnown RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 XKP51811 444 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 NCBP2P52298 156 aaKnown RBP eCLIP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 KCNJ2P63252 427 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 HBA1P69905 142 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ID2Q02363 134 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 FOLH1Q04609 750 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ABHD18Q0P651 414 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 LRIF1Q5T3J3 769 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 C8orf82Q6P1X6 216 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF551Q7Z340 670 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 CCDC116Q8IYX3 515 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 PMEPA1Q969W9 287 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 GPATCH1Q9BRR8 931 aaKnown RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ACSS1Q9NUB1 689 aaPredicted RBP20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC25A37Q9NYZ2 338 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ADA2Q9NZK5 511 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 VAPAQ9P0L0 249 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 PISDQ9UG56 409 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ERVK-11Q9UQG0 969 aa20.12■□□□□ 0.81
R3HCC1-208ENST00000522012 ADAMTS20P59510 1910 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 CCDC187A0A096LP49 1063 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 A0A1W2PS29 197 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 BLACEA4D250 179 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 MYO1GB0I1T2 1018 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 CLDN4O14493 209 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 FGF17O60258 216 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 CPNE3O75131 537 aaKnown RBP20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 FHP07954 510 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 MPIP34949 423 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 FRKP42685 505 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 HSPB3Q12988 150 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC13A2Q13183 592 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 DCAF12Q5T6F0 453 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 NANOGP8Q6NSW7 305 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 CEACAM20Q6UY09 585 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 BNC2Q6ZN30 1099 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF595Q8IYB9 648 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 SAMD14Q8IZD0 417 aaPredicted RBP20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 ZFP28Q8NHY6 868 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 AMDHD1Q96NU7 426 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 TRIM8Q9BZR9 551 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 GLIPR2Q9H4G4 154 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 NANOGQ9H9S0 305 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 SPAG4Q9NPE6 437 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 PRTFDC1Q9NRG1 225 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 TAS2R9Q9NYW1 312 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 VPS4AQ9UN37 437 aa20.11■□□□□ 0.81
R3HCC1-208ENST00000522012 MYOCOSA0A1B0GUC4 107 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 PMS2P1A4D2B8 440 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 JRKO75564 520 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 GPR75O95800 540 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 ZNF28P17035 718 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC6A2P23975 617 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 PTPN6P29350 595 aa20.1■□□□□ 0.81
R3HCC1-208ENST00000522012 SLC7A2P52569 658 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms