RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FHP07954 510 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 TPBGLP0DKB5 382 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 SPRP35270 261 aaPredicted RBP4.11□□□□□ -1.75
SKP1-208ENST00000521216 RPL27P61353 136 aaKnown RBP4.11□□□□□ -1.75
SKP1-208ENST00000521216 SLC17A1Q14916 467 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 DCAF12Q5T6F0 453 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 C9orf66Q5T8R8 295 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 EMBQ6PCB8 327 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 CD164L2Q6UWJ8 174 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 WDR49Q8IV35 697 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 STHQ8IWL8 128 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 PHC2Q8IXK0 858 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 FAM9BQ8IZU0 186 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 LYG1Q8N1E2 194 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 FBXW8Q8N3Y1 598 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 PSMA8Q8TAA3 256 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 RNASE8Q8TDE3 154 aaKnown RBP4.11□□□□□ -1.75
SKP1-208ENST00000521216 SNX21Q969T3 373 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 C5orf30Q96GV9 206 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 S1PR3Q99500 378 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 RPP25Q9BUL9 199 aaKnown RBP4.11□□□□□ -1.75
SKP1-208ENST00000521216 NUSAP1Q9BXS6 441 aaKnown RBP4.11□□□□□ -1.75
SKP1-208ENST00000521216 NT5DC2Q9H857 520 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 RARRES3Q9UL19 164 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 CPQQ9Y646 472 aa4.11□□□□□ -1.75
SKP1-208ENST00000521216 SH3PXD2BA1X283 911 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 ZNF724A8MTY0 619 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 TXNL1O43396 289 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 RTN2O75298 545 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 GOSR1O95249 250 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 HPP00738 406 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 MT-ND1P03886 318 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 OR9G9P0C7N8 305 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 GLRA1P23415 457 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 IL4RP24394 825 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 GSK3BP49841 420 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 UCP2P55851 309 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 GALK2Q01415 458 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 GK2Q14410 553 aaPredicted RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 OR1C1Q15619 314 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 POM121L1PQ3SYA9 428 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 HIGD2BQ4VC39 106 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 FAM182AQ5T1J6 154 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 AGAP7PQ5VUJ5 663 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 TOM1L2Q6ZVM7 507 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 NUFIP2Q7Z417 695 aaKnown RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 C17orf64Q86WR6 236 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 SERPINA12Q8IW75 414 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 ZNF781Q8N8C0 355 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 OR4L1Q8NH43 312 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 OR4A16Q8NH70 328 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 BCL2L2Q92843 193 aaPredicted RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 CDHR1Q96JP9 859 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 CCDC43Q96MW1 224 aaKnown RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 RUNDC3BQ96NL0 473 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 NAP1L5Q96NT1 182 aaPredicted RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 RAB40CQ96S21 281 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 MRPL9Q9BYD2 267 aaKnown RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 CXXC4Q9H2H0 198 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 DCLRE1BQ9H816 532 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 PNPLA3Q9NST1 481 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 EIF3KQ9UBQ5 218 aaKnown RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 SMAD5-AS1Q9Y6J3 95 aa4.1□□□□□ -1.75
SKP1-208ENST00000521216 COL5A2P05997 1499 aaPredicted RBP4.1□□□□□ -1.75
SKP1-208ENST00000521216 FER1L5A0AVI2 2057 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 PHF1O43189 567 aaPredicted RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 UGT1A6P19224 532 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 GEMP55040 296 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 GSTO1P78417 241 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 MFGE8Q08431 387 aaPredicted RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 RIGQ13278 110 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 MEF2DQ14814 521 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 P2RY14Q15391 338 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 LEMD1Q68G75 181 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 Q6ZRG5 221 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 SNX32Q86XE0 403 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 SFRP1Q8N474 314 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 SAMD12Q8N8I0 201 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 SIDT2Q8NBJ9 832 aaKnown RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 SPC24Q8NBT2 197 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 RELL2Q8NC24 303 aaPredicted RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 ZNRF1Q8ND25 227 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 HSD17B14Q9BPX1 270 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 DCTN5Q9BTE1 182 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 FUNDC2Q9BWH2 189 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 ABCG4Q9H172 646 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 DDX28Q9NUL7 540 aaKnown RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 DNAJC11Q9NVH1 559 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 TECRQ9NZ01 308 aaKnown RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 MTRRQ9UBK8 725 aa4.09□□□□□ -1.75
SKP1-208ENST00000521216 FOXA2Q9Y261 457 aaPredicted RBP4.09□□□□□ -1.75
SKP1-208ENST00000521216 YJEFN3A6XGL0 299 aa4.08□□□□□ -1.76
SKP1-208ENST00000521216 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
SKP1-208ENST00000521216 KINO60870 393 aaKnown RBP4.08□□□□□ -1.76
SKP1-208ENST00000521216 CSDE1O75534 798 aaKnown RBP4.08□□□□□ -1.76
SKP1-208ENST00000521216 FOLR2P14207 255 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms