RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PTPN4P29074 926 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 IL12AP29459 219 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 ADSLP30566 484 aaPredicted RBP16.72■□□□□ 0.27
SDC2-205ENST00000520233 FOLR3P41439 243 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 FOXK2Q01167 660 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 FOLH1Q04609 750 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 SRSF11Q05519 484 aaKnown RBP16.72■□□□□ 0.27
SDC2-205ENST00000520233 SLC13A2Q13183 592 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 BIKQ13323 160 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 TGIF1Q15583 401 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 DPY19L1Q2PZI1 675 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 CAMKMTQ7Z624 323 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
SDC2-205ENST00000520233 SAMD14Q8IZD0 417 aaPredicted RBP16.72■□□□□ 0.27
SDC2-205ENST00000520233 OR7A2PQ8NGA2 310 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 OR4K14Q8NGD5 310 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 KIAA1143Q96AT1 154 aaPredicted RBP16.72■□□□□ 0.27
SDC2-205ENST00000520233 SLC45A3Q96JT2 553 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 CRB3Q9BUF7 120 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 NMUR2Q9GZQ4 415 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 ATAD3AQ9NVI7 634 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 SH3BP4Q9P0V3 963 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 C5AR2Q9P296 337 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 C3orf18Q9UK00 162 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 TCFL5Q9UL49 500 aa16.72■□□□□ 0.27
SDC2-205ENST00000520233 IGKV3D-11A0A0A0MRZ8 115 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 SYNDIG1LA6NDD5 238 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 OR2W5A6NFC9 320 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 SLC22A2O15244 555 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 ERAL1O75616 437 aaKnown RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 DCTN3O75935 186 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 MAOAP21397 527 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 PIK3R1P27986 724 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 ZFP36L2P47974 494 aaKnown RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 EFNA3P52797 238 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 EMP2P54851 167 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 FOXL2P58012 376 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 IGLV3-21P80748 117 aaPredicted RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 STX4Q12846 297 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 SERTAD2Q14140 314 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 UBAP2LQ14157 1087 aaKnown RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 PRSS53Q2L4Q9 553 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 ZNF385BQ569K4 471 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 CPTPQ5TA50 214 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 ANKRD26P1Q6NSI1 321 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 NATD1Q8N6N6 113 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 OR9I1Q8NGQ6 314 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 SNIP1Q8TAD8 396 aaKnown RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 NUDT8Q8WV74 236 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 GATA6Q92908 595 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 EXOSC8Q96B26 276 aaKnown RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 KLHL29Q96CT2 875 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 EFHD1Q9BUP0 239 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 MYLK2Q9H1R3 596 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 GPN2Q9H9Y4 310 aaPredicted RBP16.71■□□□□ 0.27
SDC2-205ENST00000520233 SLC35C2Q9NQQ7 365 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 NECTIN3Q9NQS3 549 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 SEMA3GQ9NS98 782 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 GIMAP4Q9NUV9 329 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 CLDN16Q9Y5I7 305 aa16.71■□□□□ 0.27
SDC2-205ENST00000520233 NUP210LQ5VU65 1888 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 FAM234BA2RU67 622 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 TGFBR3LH3BV60 316 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 PCDH17O14917 1159 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ALOX12BO75342 701 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 IGHEP01854 428 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 UMODP07911 640 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 LAMP1P11279 417 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 F8A1P23610 371 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 XKP51811 444 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 POLR2JP52435 117 aaKnown RBP16.7■□□□□ 0.26
SDC2-205ENST00000520233 CLN3Q13286 438 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 NSDHLQ15738 373 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 CEBPEQ15744 281 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 PGS1Q32NB8 556 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 AGKQ53H12 422 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 TMEM151BQ8IW70 566 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ZNF248Q8NDW4 579 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 OR8J2Q8NGG1 315 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ZNF681Q96N22 645 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 DUSP26Q9BV47 211 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ALOXE3Q9BYJ1 711 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 BHLHE41Q9C0J9 482 aaPredicted RBP16.7■□□□□ 0.26
SDC2-205ENST00000520233 CCDC86Q9H6F5 360 aaKnown RBP16.7■□□□□ 0.26
SDC2-205ENST00000520233 CCDC167Q9P0B6 97 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ENTPD4Q9Y227 616 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 ZNF780BQ9Y6R6 833 aa16.7■□□□□ 0.26
SDC2-205ENST00000520233 TCRBV16S1A1N1A0A5B0 115 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 MED19A0JLT2 244 aaPredicted RBP16.69■□□□□ 0.26
SDC2-205ENST00000520233 MYO1GB0I1T2 1018 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 PDPK1O15530 556 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 TLX3O43711 291 aaPredicted RBP16.69■□□□□ 0.26
SDC2-205ENST00000520233 IL6P05231 212 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 C8orf89P0DMQ9 161 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 CPMP14384 443 aa16.69■□□□□ 0.26
SDC2-205ENST00000520233 PORP16435 677 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms