RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NEIL3Q8TAT5 605 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ROBO4Q8WZ75 1007 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TSLPQ969D9 159 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TM4SF19Q96DZ7 209 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ZMYND19Q96E35 227 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PTCHD1Q96NR3 888 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 APOL2Q9BQE5 337 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 GORASP1Q9BQQ3 440 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 SFXN3Q9BWM7 321 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 RBM24Q9BX46 236 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TMPRSS13Q9BYE2 586 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PCBD2Q9H0N5 130 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PIGMQ9H3S5 423 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF703Q9H7S9 590 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 LRRC40Q9H9A6 602 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 CALHM2Q9HA72 323 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 UBTD1Q9HAC8 227 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 LRTM1Q9HBL6 345 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ACKR4Q9NPB9 350 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF701Q9NV72 531 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM184CQ9NVA4 438 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MYOTQ9UBF9 498 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 RNF14Q9UBS8 474 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 ANAPC5Q9UJX4 755 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 RIMKLBQ9ULI2 386 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 BOKQ9UMX3 212 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 REXO2Q9Y3B8 237 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 NAALAD2Q9Y3Q0 740 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 TESMINQ9Y4I5 508 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 PCDHA13Q9Y5I0 950 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 NPFFR2Q9Y5X5 522 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 YLPM1P49750 1951 aaKnown RBP4.5□□□□□ -1.69
SDCBP-207ENST00000520168 DYSFO75923 2080 aa4.5□□□□□ -1.69
SDCBP-207ENST00000520168 MED12LQ86YW9 2145 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 A0A087X0T9 212 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 IGKV3D-11A0A0A0MRZ8 115 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CTAGE15A4D2H0 777 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 OR2W5A6NFC9 320 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 URADA6NGE7 173 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PSMD12O00232 456 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PFDN6O15212 129 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PJA2O43164 708 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PSMD3O43242 534 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PSTPIP1O43586 416 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 GALR3O60755 368 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PSIP1O75475 530 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 MTRF1O75570 445 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 OR2J2O76002 312 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 FAM228BP0C875 321 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CTAGE8P0CG41 777 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PECAM1P16284 738 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ENDOUP21128 410 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CRYGSP22914 178 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 RPS3P23396 243 aaKnown RBP eCLIP4.49□□□□□ -1.691e-6■■■□□ 16.9
SDCBP-207ENST00000520168 ADARP55265 1226 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 EIF3BP55884 814 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ATP5J2P56134 94 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PRAMEP78395 509 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 FOXO1Q12778 655 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TNK1Q13470 666 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PWP1Q13610 501 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TSTA3Q13630 321 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 RCAN2Q14206 197 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 POU6F1Q14863 301 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TOMM20Q15388 145 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SLC18A3Q16572 532 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ERCC6LQ2NKX8 1250 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 P3H1Q32P28 736 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 THEMIS2Q5TEJ8 643 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 HECTD2Q5U5R9 776 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PTRHD1Q6GMV3 140 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CAPN13Q6MZZ7 669 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 BHLHB9Q6PI77 547 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 OPN5Q6U736 354 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 MFSD7Q6UXD7 560 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 VN1R4Q7Z5H5 301 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 LINC00523Q86TU6 105 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ASPGQ86U10 573 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CTAGE6Q86UF2 777 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PDSS2Q86YH6 399 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CDKL3Q8IVW4 592 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 CTAGE4Q8IX94 777 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 KLHDC8BQ8IXV7 354 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SLC35F6Q8N357 371 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 MPP5Q8N3R9 675 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TBC1D19Q8N5T2 526 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 FBXO15Q8NCQ5 510 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 C7orf57Q8NEG2 295 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 OR4L1Q8NH43 312 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 OR8K3Q8NH51 312 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SLC13A3Q8WWT9 602 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 UCN3Q969E3 161 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ATP6V1E2Q96A05 226 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TRMT61AQ96FX7 289 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 RASL10BQ96S79 203 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 TM9SF2Q99805 663 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms