RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ACADVLP49748 655 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 CLCNKAP51800 687 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 MFAP4P55083 255 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 EIF3BP55884 814 aaKnown RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 WNT3P56703 355 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 CLDN6P56747 220 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 OR1D5P58170 312 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 CCL7P80098 99 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 B4GALNT1Q00973 533 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 E2F1Q01094 437 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ACVR1Q04771 509 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 RELQ04864 619 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 HSPA14Q0VDF9 509 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ABRQ12979 859 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ZNF273Q14593 569 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ITIH4Q14624 930 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 KIR2DS5Q14953 304 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 BCL7AQ4VC05 210 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 C14orf28Q4W4Y0 310 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 IGSF11Q5DX21 431 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ZNF766Q5HY98 468 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 SPANXN3Q5MJ09 141 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 TEX35Q5T0J7 233 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 METTL11BQ5VVY1 283 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 NKAIN2Q5VXU1 208 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ZNF470Q6ECI4 717 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 C3orf62Q6ZUJ4 267 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 KCTD9Q7L273 389 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 SPATA19Q7Z5L4 167 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 TMEM135Q86UB9 458 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 STK32CQ86UX6 486 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 KCNMB4Q86W47 210 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ZNF761Q86XN6 746 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 DENND6AQ8IWF6 608 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 IFT20Q8IY31 132 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 UNC5BQ8IZJ1 945 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 KRT222Q8N1A0 295 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 PQLC1Q8N2U9 271 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ARL14Q8N4G2 192 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 STPG3Q8N7X2 389 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 FBXO36Q8NEA4 188 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 OR52E1Q8NGJ3 308 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 OR2L2Q8NH16 312 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 CFAP61Q8NHU2 1237 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 FBXO25Q8TCJ0 367 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 C17orf50Q8WW18 174 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 PATE1Q8WXA2 126 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 KAT2AQ92830 837 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 PEX13Q92968 403 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 NAT6Q93015 286 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ART4Q93070 314 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 FAM136AQ96C01 138 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 LRRC39Q96DD0 335 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 LIN37Q96GY3 246 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 C12orf66Q96MD2 445 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 GFM1Q96RP9 751 aaKnown RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 CCDC3Q9BQI4 270 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 TIMM29Q9BSF4 260 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 NAT9Q9BTE0 207 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 WWP1Q9H0M0 922 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 DENND2DQ9H6A0 471 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 MANSC1Q9H8J5 431 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 SYTL2Q9HCH5 934 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 FBXO6Q9NRD1 293 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 FAM114A2Q9NRY5 505 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 TREX1Q9NSU2 369 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 IMP3Q9NV31 184 aaKnown RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 BEX4Q9NWD9 120 aaPredicted RBP2.64□□□□□ -1.99
SKP1-204ENST00000517691 GRHL1Q9NZI5 618 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 GNPTGQ9UJJ9 305 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ZFP69BQ9UJL9 534 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 ACSL5Q9ULC5 683 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 PRSS21Q9Y6M0 314 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 RNF215Q9Y6U7 377 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 CHD5Q8TDI0 1954 aa2.64□□□□□ -1.99
SKP1-204ENST00000517691 EML5Q05BV3 1969 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 SHROOM3Q8TF72 1996 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 FAM186AA6NE01 2351 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 IGLV3-16A0A075B6K0 115 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 TRBV5-4A0A0C4DH59 114 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 LY6G6EA0A0G2JKS1 128 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 PRAMEF33A0A0G2JMD5 474 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 A0A1W2PQM1 296 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 NCF1BA6NI72 391 aaPredicted RBP2.63□□□□□ -1.99
SKP1-204ENST00000517691 ZSCAN5BA6NJL1 495 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 OR5K4A6NMS3 321 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 A8MU76 341 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 NCF1CA8MVU1 366 aaPredicted RBP2.63□□□□□ -1.99
SKP1-204ENST00000517691 H3BMM5 538 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 QSOX1O00391 747 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 PPM1DO15297 605 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 NUDT21O43809 227 aaKnown RBP2.63□□□□□ -1.99
SKP1-204ENST00000517691 NRP2O60462 931 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 CYTIPO60759 359 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 PIAS1O75925 651 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 HAUS5O94927 633 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 TOP3BO95985 862 aaKnown RBP2.63□□□□□ -1.99
SKP1-204ENST00000517691 MT-CO3P00414 261 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 TGFAP01135 160 aa2.63□□□□□ -1.99
SKP1-204ENST00000517691 GP1BAP07359 652 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms