RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 RUVBL2Q9Y230 463 aaKnown RBP4.82□□□□□ -1.64
RNF139-202ENST00000517684 NME7Q9Y5B8 376 aa4.82□□□□□ -1.64
RNF139-202ENST00000517684 RAI2Q9Y5P3 530 aa4.82□□□□□ -1.64
RNF139-202ENST00000517684 SESN1Q9Y6P5 492 aa4.82□□□□□ -1.64
RNF139-202ENST00000517684 SCN1AP35498 2009 aa4.82□□□□□ -1.64
RNF139-202ENST00000517684 TSC2P49815 1807 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SH3PXD2BA1X283 911 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM90A8PA6NJQ4 464 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 EEF2KO00418 725 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 NDUFS3O75489 264 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SRP72O76094 671 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 NDUFB4O95168 129 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 C22orf31O95567 290 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 F7P08709 466 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 IQCF3P0C7M6 154 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 PSG1P11464 419 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 NAGAP17050 411 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ARF4P18085 180 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 TCN1P20061 433 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 GNLYP22749 145 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 RPS12P25398 132 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 NMBRP28336 390 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ADORA2BP29275 332 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 HMOX2P30519 316 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 GCH1P30793 250 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 PSMB10P40306 273 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ACADVLP49748 655 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ATP4BP51164 291 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 NDST2P52849 883 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 DNAJB13P59910 316 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ITGA7Q13683 1181 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FASTKQ14296 549 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 PRPSAP1Q14558 356 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SHBQ15464 509 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 PSMD5Q16401 504 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 NRF1Q16656 503 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 UGP2Q16851 508 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SLC25A52Q3SY17 297 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SAMD4BQ5PRF9 694 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 C6orf141Q5SZD1 244 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 OTUD1Q5VV17 481 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM45BPQ6NSW5 357 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 RWDD4Q6NW29 188 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 DUS1LQ6P1R4 473 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 BNIPLQ7Z465 357 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 GPR141Q7Z602 305 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ZC3HC1Q86WB0 502 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM131BQ86XD5 332 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 CRYBG2Q8N1P7 616 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 PCDH20Q8N6Y1 951 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 LRRC52Q8N7C0 313 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 DNAAF3Q8N9W5 541 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ZBTB8BQ8NAP8 495 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 SMYD1Q8NB12 490 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ACVR1CQ8NER5 493 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM45AQ8TCE6 357 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ADAMTS16Q8TE57 1224 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 KCTD4Q8WVF5 259 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SNRNP27Q8WVK2 155 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 TRIB2Q92519 343 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SGCDQ92629 289 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SLCO4A1Q96BD0 722 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 MOCOSQ96EN8 888 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 HMCESQ96FZ2 354 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SLC41A2Q96JW4 573 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 MARK4Q96L34 752 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 RANBP9Q96S59 729 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 VAT1Q99536 393 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SLC29A1Q99808 456 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FAM110AQ9BQ89 295 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 CENPOQ9BU64 300 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 MLPHQ9BV36 600 aaPredicted RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 KIFC1Q9BW19 673 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 FTHL17Q9BXU8 183 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 TRIM15Q9C019 465 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 GBA3Q9H227 469 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SEMA6AQ9H2E6 1030 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SNX25Q9H3E2 840 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 LIN28AQ9H9Z2 209 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 SLC28A3Q9HAS3 691 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 MRM3Q9HC36 420 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 OLAHQ9NV23 265 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ARMC1Q9NVT9 282 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 DUS2Q9NX74 493 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 OR6C3Q9NZP0 311 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 CD300AQ9UGN4 299 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 HACL1Q9UJ83 578 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 PTBP2Q9UKA9 531 aaKnown RBP4.81□□□□□ -1.64
RNF139-202ENST00000517684 CDH7Q9ULB5 785 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 STAP1Q9ULZ2 295 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 ACOT9Q9Y305 439 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SH3GLB1Q9Y371 365 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 HES2Q9Y543 173 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SBF1O95248 1867 aa4.81□□□□□ -1.64
RNF139-202ENST00000517684 SHROOM3Q8TF72 1996 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms