RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PKP4Q99569 1192 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDCA3Q99618 268 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPATA25Q9BR10 227 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NTPCRQ9BSD7 190 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DPH7Q9BTV6 452 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 OPN3Q9H1Y3 402 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GORASP2Q9H8Y8 452 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 BCO1Q9HAY6 547 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SAGE1Q9NXZ1 904 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADAM28Q9UKQ2 775 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCML1Q9UN30 329 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPIEQ9UNP9 301 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF6Q9Y252 685 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SIT1Q9Y3P8 196 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHGA9Q9Y5G4 932 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHGA7Q9Y5G6 932 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHGA1Q9Y5H4 931 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TIMM13Q9Y5L4 95 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FMN2Q9NZ56 1722 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANKRD36CQ5JPF3 1778 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A0B4J293 547 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 LOC100506127A0A0U1RQW1 187 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 LOC100130705A0A1B0GUX0 176 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1W2PRB8 838 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TCRBV9S1A1TA0A576 114 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TCRBV7S2A1N4TA0A589 114 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2A25A4D2G3 310 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM149AA5PLN7 773 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 BTBD17A6NE02 478 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 KDM4EB2RXH2 506 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRDCB7Z8K6 153 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 E9PI62 339 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 I6L893 689 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 M0QYV0 167 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MRASO14807 208 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DCLK1O15075 740 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PMM2O15305 246 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TOX3O15405 576 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MSH4O15457 936 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRODHO43272 600 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TPST1O60507 370 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DPM1O60762 260 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 KERAO60938 352 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRKRAO75569 313 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CRCPO75575 148 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ABLIM3O94929 683 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRSS23O95084 383 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 AHSA1O95433 338 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 LGI1O95970 557 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OTCP00480 354 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCG5P05408 212 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASGR2P07307 311 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 GALTP07902 379 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 HCKP08631 526 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CNPP09543 421 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 METTL15P1P0C7V9 234 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF888P0CJ79 500 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTPRFP10586 1907 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARSBP15848 533 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANXA7P20073 488 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 EFNA1P20827 205 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAGP20916 626 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACO1P21399 889 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 S1PR1P21453 382 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 FPR2P25090 351 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 LCN1P31025 176 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TNFSF8P32971 234 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TM4SF4P48230 202 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 LHX1P48742 406 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 GMPSP49915 693 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF81P51508 661 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUDT6P53370 316 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 EEFSECP57772 596 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TGFB2P61812 414 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUTF2P61970 127 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NCS1P62166 190 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DYNLL1P63167 89 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC35A2P78381 396 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRNB3Q05901 458 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 GABPAQ06546 454 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CNTN1Q12860 1018 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTPRJQ12913 1337 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRPSAP1Q14558 356 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 EIF4HQ15056 248 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DHCR24Q15392 516 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TBCEQ15813 527 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CYP51A1Q16850 503 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZXDCQ2QGD7 858 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DACT2Q5SW24 774 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF691Q5VV52 312 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 VASNQ6EMK4 673 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ABLIM2Q6H8Q1 611 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CES5AQ6NT32 575 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDC73Q6P1J9 531 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CLEC2AQ6UVW9 174 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC36A4Q6YBV0 504 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CERS6Q6ZMG9 384 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms