RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 C17orf64Q86WR6 236 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 SYCP3Q8IZU3 236 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 GVQW1Q8N7I0 195 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 C16orf58Q96GQ5 468 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 PANX3Q96QZ0 392 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 SSX3Q99909 188 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 ZNF350Q9GZX5 532 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 ELL3Q9HB65 397 aaPredicted RBP3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 ABCB8Q9NUT2 735 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 ABCD2Q9UBJ2 740 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 NAALAD2Q9Y3Q0 740 aa3.67□□□□□ -1.82
SMARCA5-203ENST00000515531 FOXI3A8MTJ6 420 aaPredicted RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 A8MU10 97 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 H0Y626 953 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 VENTXO95231 258 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 HSD17B1P14061 328 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 CALML3P27482 149 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 PPP2R1BP30154 601 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 OR1D2P34982 312 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 SERPINB6P35237 376 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 SNU13P55769 128 aaKnown RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 ROR1Q01973 937 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 MFGE8Q08431 387 aaPredicted RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 Q1RN00 199 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 C1orf189Q5VU69 101 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 NHLRC1Q6VVB1 395 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 TMEM126BQ8IUX1 230 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 CCDC71Q8IV32 467 aaPredicted RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 LAX1Q8IWV1 398 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 CD177Q8N6Q3 437 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 GOLGA5Q8TBA6 731 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 MRPL24Q96A35 216 aaKnown RBP3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 SERAC1Q96JX3 654 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 GUCD1Q96NT3 240 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 RAB40CQ96S21 281 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 DPEP3Q9H4B8 488 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 PSORS1C1Q9UIG5 152 aa3.66□□□□□ -1.82
SMARCA5-203ENST00000515531 POGZQ7Z3K3 1410 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 KLLNB2CW77 178 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 LRRTM2O43300 516 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ANXA9O76027 345 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 KBTBD11O94819 623 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 PDGFBP01127 241 aaPredicted RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 EPOP01588 193 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 DNAH10OSP0CZ25 163 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 GPX3P22352 226 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 GLRA1P23415 457 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 KCNK10P57789 538 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 RPL27P61353 136 aaKnown RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 PPIAP62937 165 aaKnown RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 TRA2BP62995 288 aaKnown RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ASIC1P78348 528 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 MEF2DQ14814 521 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 EMC2Q15006 297 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 CCL14Q16627 93 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 TYSND1Q2T9J0 566 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 CNPY1Q3B7I2 92 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 MARC1Q5VT66 337 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ABRAXAS1Q6UWZ7 409 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 NUP93Q8N1F7 819 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 OR6T1Q8NGN1 323 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 GDAP1Q8TB36 358 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 JAKMIP1Q96N16 626 aaKnown RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 S1PR3Q99500 378 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ACPTQ9BZG2 426 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ZDHHC6Q9H6R6 413 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 RNPEPL1Q9HAU8 725 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 DHRS4-AS1Q9P1J3 65 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 EIF3KQ9UBQ5 218 aaKnown RBP3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 KCNK6Q9Y257 313 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 ADAMTS9Q9P2N4 1935 aa3.65□□□□□ -1.83
SMARCA5-203ENST00000515531 AGRNO00468 2067 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 RNF212BA8MTL3 300 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 SRPX2O60687 465 aaPredicted RBP3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 CPNE6O95741 557 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 GLULP15104 373 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 KLK2P20151 261 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 LCP2Q13094 533 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 GIT2Q14161 759 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 ABRAXAS2Q15018 415 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 OR1C1Q15619 314 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 PCK2Q16822 640 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 FUT11Q495W5 492 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 SLC22A6Q4U2R8 563 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 DDI2Q5TDH0 399 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 RFWD3Q6PCD5 774 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 OR1K1Q8NGR3 316 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 AGPAT1Q99943 283 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 WWP1Q9H0M0 922 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 GDF3Q9NR23 364 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 ARMCX1Q9P291 453 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 EXOC7Q9UPT5 735 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 LIPT1Q9Y234 373 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 SLC6A5Q9Y345 797 aa3.64□□□□□ -1.83
SMARCA5-203ENST00000515531 TRAV9-2A0A087WT02 112 aa3.63□□□□□ -1.83
SMARCA5-203ENST00000515531 A0A0U1RQK1 487 aa3.63□□□□□ -1.83
SMARCA5-203ENST00000515531 A0A1W2PRQ8 180 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms