RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.69□□□□□ -0.38
TCOF1-215ENST00000515516 LYARQ9NX58 379 aaKnown RBP12.69□□□□□ -0.38
TCOF1-215ENST00000515516 PSD3Q9NYI0 1048 aa12.69□□□□□ -0.38
TCOF1-215ENST00000515516 RNF11Q9Y3C5 154 aa12.69□□□□□ -0.38
TCOF1-215ENST00000515516 CPAMD8Q8IZJ3 1885 aa12.69□□□□□ -0.38
TCOF1-215ENST00000515516 NBPF19A0A087WUL8 3843 aa12.69□□□□□ -0.38
TCOF1-215ENST00000515516 A0A087WUV0 522 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 IQANK1A0A1B0GTG1 560 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 TMEM200CA6NKL6 621 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 FGF17O60258 216 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 SIX3O95343 332 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ETHE1O95571 254 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 COL6A2P12110 1019 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ALOX15P16050 662 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 PTGER1P34995 402 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 SOX3P41225 446 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 FOLH1Q04609 750 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 CUL3Q13618 768 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF630Q2M218 657 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 TECRLQ5HYJ1 363 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 C18orf63Q68DL7 685 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 RGS9BPQ6ZS82 235 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 DOLPP1Q86YN1 238 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF321PQ8N8H1 164 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 L3MBTL4Q8NA19 623 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 PPWD1Q96BP3 646 aaKnown RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 MTFMTQ96DP5 389 aaKnown RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 SGCZQ96LD1 299 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 SERPINI1Q99574 410 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 AHSPQ9NZD4 102 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 DMGDHQ9UI17 866 aaKnown RBP12.68□□□□□ -0.38
TCOF1-215ENST00000515516 ATG4BQ9Y4P1 393 aa12.68□□□□□ -0.38
TCOF1-215ENST00000515516 A0A1B0GTH9 108 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 E9PLN8 166 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 STX16O14662 325 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 PROM1O43490 865 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 PDE9AO76083 593 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 GPR75O95800 540 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 P04436 131 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 TPOP07202 933 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 FAM58BPP0C7Q3 252 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 NR2F6P10588 404 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 COX6B1P14854 86 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 CNR1P21554 472 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 NEK2P51955 445 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 PPIAP62937 165 aaKnown RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 IGLV3-21P80748 117 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 IFT88Q13099 833 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF750Q32MQ0 723 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 C10orf62Q5T681 223 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ARHGAP11AQ6P4F7 1023 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 GK5Q6ZS86 529 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 SLC29A4Q7RTT9 530 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 SLC22A16Q86VW1 577 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 NUDT13Q86X67 352 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 PLD6Q8N2A8 252 aaKnown RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 SLC22A8Q8TCC7 542 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF721Q8TF20 911 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 VKORC1Q9BQB6 163 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 MRPL57Q9BQC6 102 aaKnown RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 CNPPD1Q9BV87 410 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
TCOF1-215ENST00000515516 SACM1LQ9NTJ5 587 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 COQ3Q9NZJ6 369 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 XPR1Q9UBH6 696 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF180Q9UJW8 692 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 PPT2Q9UMR5 302 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 SCN2AQ99250 2005 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 UNC79Q9P2D8 2635 aa12.67□□□□□ -0.38
TCOF1-215ENST00000515516 A0A0A6YYD5 115 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 TRIM49D1C9J1S8 452 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 OR7A17O14581 309 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 EEDO75530 441 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 CLDN14O95500 239 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 SNRPAP09012 282 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 GRNP28799 593 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 BSGP35613 385 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 MAGEA12P43365 314 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 HNRNPH2P55795 449 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ASPHQ12797 758 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 ZNF267Q14586 743 aaPredicted RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 MPEG1Q2M385 716 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 CMPK2Q5EBM0 449 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 TEX35Q5T0J7 233 aa12.66□□□□□ -0.38
TCOF1-215ENST00000515516 UBAP2Q5T6F2 1119 aaKnown RBP12.66□□□□□ -0.38
TCOF1-215ENST00000515516 NDUFAF5Q5TEU4 345 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms