RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PHYKPLQ8IUZ5 450 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 C12orf45Q8N5I9 185 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 NANOGP1Q8N7R0 232 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF557Q8N988 423 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 BPIFB1Q8TDL5 484 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM216AQ8WUB2 273 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 MAFIPQ8WZ33 124 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 ELMO1Q92556 727 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 HHIPL1Q96JK4 782 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 CCDC74BQ96LY2 380 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 FCRL4Q96PJ5 515 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 AARSD1Q9BTE6 412 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 VN1R3Q9BXE9 311 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC26A1Q9H2B4 701 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 POPDC3Q9HBV1 291 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 NLE1Q9NVX2 485 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 CACNA2D2Q9NY47 1150 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 PPP4R1LQ9P1A2 415 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF639Q9UID6 485 aa7.15□□□□□ -1.26
PDLIM5-219ENST00000514743 PRSS51A0A1B0GVH4 220 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 A0A1B0GVM2 712 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 RFPL4AA6NLU0 287 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF879B4DU55 563 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 F5H5T6 163 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 RFPL4AL1F8VTS6 287 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 K7ERQ8 282 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 KHNYNO15037 678 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 EFSO43281 561 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 HSPA12AO43301 675 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SSX4O60224 188 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 AOC2O75106 756 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SIX3O95343 332 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CD160O95971 181 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 ALDH1A1P00352 501 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 KLKB1P03952 638 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CCNYL3P0C7X3 344 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SELPP16109 830 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CHRM3P20309 590 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 IGFBP5P24593 272 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CSTF1Q05048 431 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 POU4F2Q12837 409 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SLAMF1Q13291 335 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF235Q14590 738 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 PLCL1Q15111 1095 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 TMEM236Q5W0B7 351 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 REP15Q6BDI9 236 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 NXPE4Q6UWF7 544 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 TRILQ7L0X0 811 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 FUNDC1Q8IVP5 155 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 MEIOBQ8N635 442 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 OR9I1Q8NGQ6 314 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 OR4L1Q8NH43 312 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 ELP5Q8TE02 316 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 WBP2Q969T9 261 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CDKN2AIPNLQ96HQ2 116 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 TPD52L3Q96J77 140 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC45A3Q96JT2 553 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SMAD5Q99717 465 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 PPIL3Q9H2H8 161 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 DSN1Q9H410 356 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 NIPAL2Q9H841 368 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 EML4Q9HC35 981 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 FBRSL1Q9HCM7 1045 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 C14orf105Q9NVL8 296 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 TREM2Q9NZC2 230 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CCDC167Q9P0B6 97 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SSR3Q9UNL2 185 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 MMACHCQ9Y4U1 282 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 CROCCQ5TZA2 2017 aa7.15□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC22A23A1A5C7 686 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SAC3D1A6NKF1 404 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF26P17031 533 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ME2P23368 584 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PIK3CGP48736 1102 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 RPS24P62847 133 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SNTB1Q13884 538 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 GFOD2Q3B7J2 385 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SPOUT1Q5T280 376 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 KBTBD8Q8NFY9 601 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 OR7A2PQ8NGA2 310 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 RHEBL1Q8TAI7 183 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CD99L2Q8TCZ2 262 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 C2orf15Q8WU43 125 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 NSUN5Q96P11 429 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 KCNC2Q96PR1 638 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TRMOQ9BU70 441 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MRPL37Q9BZE1 423 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MAGEH1Q9H213 219 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TUBB1Q9H4B7 451 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FBXL12Q9NXK8 326 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PCDHB7Q9Y5E2 793 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 DNAJC15Q9Y5T4 150 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PTGDR2Q9Y5Y4 395 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FKBP7Q9Y680 259 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PTPRSQ13332 1948 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 G3V2T6 193 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 DNASE2O00115 360 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 NDUFS8O00217 210 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 UBDO15205 165 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 COCHO43405 550 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms