RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 AKAP7Q9P0M2 348 aaPredicted RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 TRMT6Q9UJA5 497 aaKnown RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 MRTO4Q9UKD2 239 aaKnown RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF346Q9UL40 294 aaKnown RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 SALL1Q9NSC2 1324 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 DHX29Q7Z478 1369 aaKnown RBP4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 FER1L5A0AVI2 2057 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 TRGV8A0A0C4DH27 118 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 KIAA0513O60268 411 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 ANXA9O76027 345 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 ABHD2P08910 425 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 HLA-DPA1P20036 260 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 GSK3BP49841 420 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 GFPT1Q06210 699 aaPredicted RBP4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 HSPA14Q0VDF9 509 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 RAPSNQ13702 412 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 KRT31Q15323 416 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 POM121L1PQ3SYA9 428 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PRAMEF7Q5VXH5 474 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 CDHR3Q6ZTQ4 885 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 TOM1L2Q6ZVM7 507 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 RPAINQ86UA6 219 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 RNF130Q86XS8 419 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PHC2Q8IXK0 858 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PEX5LQ8IYB4 626 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PARP8Q8N3A8 854 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 RTL3Q8N8U3 475 aaKnown RBP4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 RELL2Q8NC24 303 aaPredicted RBP4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 C17orf47Q8NEP4 570 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PNPLA2Q96AD5 504 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 SLCO4A1Q96BD0 722 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF560Q96MR9 790 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 FAM213AQ9BRX8 229 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 STRADBQ9C0K7 418 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 CARD9Q9H257 536 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 TMEM245Q9H330 911 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 LIME1Q9H400 295 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 MOB1AQ9H8S9 216 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 MARCH7Q9H992 704 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 PIGVQ9NUD9 493 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 ACOXLQ9NUZ1 547 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 THYN1Q9P016 225 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 TEKT2Q9UIF3 430 aa4.14□□□□□ -1.75
HMGCS1-207ENST00000514610 IGLON5A6NGN9 336 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 PDHXO00330 501 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 FRAT2O75474 233 aaPredicted RBP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 BAG2O95816 211 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 IGHG1P01857 330 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 STIP1P31948 543 aaKnown RBP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 PITPNBP48739 271 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 TKTL1P51854 596 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 CNN1P51911 297 aaKnown RBP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 LIMK2P53671 638 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 MS4A2Q01362 244 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 GALK2Q01415 458 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 CBX3Q13185 183 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 Q6ZRG5 221 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 GTSCR1Q86UQ5 136 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 LMNTD2Q8IXW0 634 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 OR6M1Q8NGM8 313 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 TAF15Q92804 592 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 ATP6V0A1Q93050 837 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 ATF6BQ99941 703 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 SOSTQ9BQB4 213 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC26A1Q9H2B4 701 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 GANQ9H2C0 597 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 GDF3Q9NR23 364 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 HMG20BQ9P0W2 317 aa4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 DIMT1Q9UNQ2 313 aaKnown RBP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 TDRKHQ9Y2W6 561 aaKnown RBP4.13□□□□□ -1.75
HMGCS1-207ENST00000514610 CCDC69A6NI79 296 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 TMCO5BA8MYB1 307 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 SHISA9B4DS77 424 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 NEDD8-MDP1E9PL57 170 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 AREGP15514 252 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 FERP16591 822 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 CAPN2P17655 700 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 GEMP55040 296 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 P2RY14Q15391 338 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 CCL14Q16627 93 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 KRTAP27-1Q3LI81 207 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 C1orf186Q6ZWK4 172 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 TIPARPQ7Z3E1 657 aaKnown RBP4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 MYPOPQ86VE0 399 aaPredicted RBP4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC47A2Q86VL8 602 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 GVQW1Q8N7I0 195 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 BANPQ8N9N5 519 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 CHDHQ8NE62 594 aaPredicted RBP4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 OR1B1Q8NGR6 318 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 GOLGA5Q8TBA6 731 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 PCNPQ8WW12 178 aaKnown RBP4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 TCP11Q8WWU5 503 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 ESAMQ96AP7 390 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 GPR137Q96N19 417 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 FUNDC2Q9BWH2 189 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 JPT2Q9H910 190 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms