RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SEMA4BQ9NPR2 832 aaPredicted RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 IGSF5Q9NSI5 407 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 TNFRSF10DQ9UBN6 386 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 K7EPI3 171 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 KERAO60938 352 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 PRKRAO75569 313 aaKnown RBP11.28□□□□□ -0.6
SNHG4-208ENST00000514110 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 GSTA2P09210 222 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 MTHFD2P13995 350 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 ACVR2AP27037 513 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 MSX1P28360 303 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 STT3AP46977 705 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 DDX39BQ13838 428 aaKnown RBP11.28□□□□□ -0.6
SNHG4-208ENST00000514110 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 TRADDQ15628 312 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 PIGGQ5H8A4 983 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 C18orf63Q68DL7 685 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 RTL6Q6ICC9 239 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 OR4C11Q6IEV9 310 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 OPN5Q6U736 354 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 RAPH1Q70E73 1250 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 DMRTC2Q8IXT2 367 aaPredicted RBP11.28□□□□□ -0.6
SNHG4-208ENST00000514110 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 PPM1NQ8N819 430 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 OR5M3Q8NGP4 307 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 HUS1BQ8NHY5 278 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 DOK4Q8TEW6 326 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 UBE2E3Q969T4 207 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 NXNL1Q96CM4 212 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 SGCZQ96LD1 299 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 DGAT2Q96PD7 388 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
SNHG4-208ENST00000514110 NMRAL1Q9HBL8 299 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 ATG4BQ9Y4P1 393 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 FAM215AQ9Y5M1 114 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 SPACA6W5XKT8 324 aa11.28□□□□□ -0.6
SNHG4-208ENST00000514110 PHF3Q92576 2039 aaKnown RBP11.28□□□□□ -0.6
SNHG4-208ENST00000514110 ATP6AP2A0A1C7CYW4 349 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 OR14I1A6ND48 311 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 PLPP1O14494 284 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 BCKDKO14874 412 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 ATP6AP2O75787 350 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 NADKO95544 446 aaPredicted RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 P04436 131 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 LTA4HP09960 611 aaKnown RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 EPB42P16452 691 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 CRABP2P29373 138 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 SERPINB1P30740 379 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 PIGAP37287 484 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 MAGEA4P43358 317 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 PLTPP55058 493 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 IRF9Q00978 393 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 TNFRSF17Q02223 184 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 FOLH1Q04609 750 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 MPEG1Q2M385 716 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 HYAL4Q2M3T9 481 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 ZNF791Q3KP31 576 aaPredicted RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 GRHL2Q6ISB3 625 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 ZNF585AQ6P3V2 769 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 GPR180Q86V85 440 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 CCDC25Q86WR0 208 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 TEX9Q8N6V9 391 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 NUBPLQ8TB37 319 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 FBF1Q8TES7 1133 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 RGMAQ96B86 450 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 RBM18Q96H35 190 aaKnown RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 MTERF1Q99551 399 aaKnown RBP11.27□□□□□ -0.61
SNHG4-208ENST00000514110 TTYH2Q9BSA4 534 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 SH2D2AQ9NP31 389 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 DMRT3Q9NQL9 472 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 F8P00451 2351 aa11.27□□□□□ -0.61
SNHG4-208ENST00000514110 A0A0G2JNJ9 132 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 LRRC14BA6NHZ5 514 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 WASHC1A8K0Z3 465 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 AQP7O14520 342 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 PROM1O43490 865 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 SUSD5O60279 629 aa11.26□□□□□ -0.61
SNHG4-208ENST00000514110 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
SNHG4-208ENST00000514110 HOXD4P09016 255 aaPredicted RBP11.26□□□□□ -0.61
SNHG4-208ENST00000514110 RFPL3SP0C7P2 107 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms