RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 RWDD4Q6NW29 188 aaKnown RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 TMCO3Q6UWJ1 677 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 CYP4V2Q6ZWL3 525 aaPredicted RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 TMEM150AQ86TG1 271 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 LONP2Q86WA8 852 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 LRRC49Q8IUZ0 686 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 PM20D2Q8IYS1 436 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 CMTM8Q8IZV2 173 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 PYROXD2Q8N2H3 581 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 PRELID2Q8N945 189 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 TMEM116Q8NCL8 245 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 C1orf54Q8WWF1 131 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 P3H4Q92791 437 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 ZNF707Q96C28 371 aaPredicted RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 TBC1D31Q96DN5 1066 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 C17orf77Q96MU5 243 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 CSPG4P5Q96PW8 444 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 SMC6Q96SB8 1091 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 AP1M1Q9BXS5 423 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 ZYG11BQ9C0D3 744 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 RAB6CQ9H0N0 254 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 RAB17Q9H0T7 212 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 LRRC19Q9H756 370 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 MTMR10Q9NXD2 777 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 GDE1Q9NZC3 331 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 ZNF624Q9P2J8 865 aaPredicted RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 ZNF148Q9UQR1 794 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 CPQQ9Y646 472 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 MTCH2Q9Y6C9 303 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 DENND4AQ7Z401 1863 aa4.13□□□□□ -1.75
SSBP2-217ENST00000513785 NYNRINQ9P2P1 1898 aaKnown RBP4.13□□□□□ -1.75
SSBP2-217ENST00000513785 NUMA1Q14980 2115 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 IGLV3-10A0A075B6K4 115 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 NPIPB15A6NHN6 443 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 H7C0C1 242 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CIDEAO60543 219 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CLDN11O75508 207 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 AGR2O95994 175 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CD48P09326 243 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ERCC2P18074 760 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 HOXC13P31276 330 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 STIP1P31948 543 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 COILP38432 576 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CCR2P41597 374 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ATP5OP48047 213 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ARCN1P48444 511 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 DRG2P55039 364 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 VCPP55072 806 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CDH4P55283 916 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 YBEYP58557 167 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 EIF3EP60228 445 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 DYNLT1P63172 113 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 DR1Q01658 176 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 OTUD4Q01804 1114 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ZNF33AQ06730 810 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 C2orf54Q08AI8 447 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 SNX1Q13596 522 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 DPYSQ14117 519 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PAFAH1B3Q15102 231 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PDK1Q15118 436 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 SIX1Q15475 284 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 TEAD2Q15562 447 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 TEX35Q5T0J7 233 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 C8orf74Q6P047 294 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CCDC137Q6PK04 289 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 C4orf22Q6V702 233 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 SDCCAG8Q86SQ7 713 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CCDC190Q86UF4 302 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CDKL3Q8IVW4 592 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ARID3BQ8IVW6 561 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 KLHL7Q8IXQ5 586 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 LGI2Q8N0V4 545 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PQLC3Q8N755 202 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 FRMD1Q8N878 549 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 RTL3Q8N8U3 475 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ZNF557Q8N988 423 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 HJURPQ8NCD3 748 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 MAPK1IP1LQ8NDC0 245 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 ACTL9Q8TC94 416 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 HM13Q8TCT9 377 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 TFB1MQ8WVM0 346 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 SMARCD2Q92925 531 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 MOAP1Q96BY2 351 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 OTUB2Q96DC9 234 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 TCEAL4Q96EI5 215 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 TMA16Q96EY4 203 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CCDC114Q96M63 670 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 NECTIN4Q96NY8 510 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 RPRD1AQ96P16 312 aaPredicted RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 CYP2S1Q96SQ9 504 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 KRT12Q99456 494 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PRMT1Q99873 361 aaKnown RBP4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PIGMQ9H3S5 423 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 SCPEP1Q9HB40 452 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 GKN1Q9NS71 199 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 OGFRQ9NZT2 677 aa4.12□□□□□ -1.75
SSBP2-217ENST00000513785 PCYOX1Q9UHG3 505 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms