RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 DEFB108AA8MXU0 73 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 SIAH2O43255 324 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 TRIM3O75382 744 aaPredicted RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 C1QAP02745 245 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 HPNP05981 417 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 TMIGD3P0DMS9 266 aaPredicted RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 TNNI3P19429 210 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 CERS1P27544 350 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 CPA2P48052 419 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 CDK9P50750 372 aaKnown RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 STX4Q12846 297 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 SERTAD2Q14140 314 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 RCN2Q14257 317 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 ADPRMQ3LIE5 342 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 HMBOX1Q6NT76 420 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 C20orf204Q6ZNR8 217 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 SYDE1Q6ZW31 735 aaPredicted RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 THOC6Q86W42 341 aaKnown RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 C9orf40Q8IXQ3 194 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 TTLQ8NG68 377 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 CALML6Q8TD86 181 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 ZNF597Q96LX8 424 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 RUNDC3BQ96NL0 473 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 SERINC2Q96SA4 455 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 SFXN3Q9BWM7 321 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 UBQLN3Q9H347 655 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 TAS2R13Q9NYV9 303 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 C6orf203Q9P0P8 240 aaPredicted RBP10.02□□□□□ -0.81
DDX41-216ENST00000513562 NDRG3Q9UGV2 375 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 MAD1L1Q9Y6D9 718 aa10.02□□□□□ -0.81
DDX41-216ENST00000513562 MAGEB16A2A368 324 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 ANKRD33BA6NCL7 494 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 CTIFO43310 598 aaKnown RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 LRATO95237 230 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 GUCA1CO95843 209 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 TBX6O95947 436 aaPredicted RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 IGKV3-11P04433 115 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 ENO2P09104 434 aaPredicted RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 GSTM2P28161 218 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 MAGEA6P43360 314 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 PTH2RP49190 550 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 PLA2G16P53816 162 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 MTTPP55157 894 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 CDKN2DP55273 166 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 SARNPP82979 210 aaKnown RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 FOXF2Q12947 444 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 TBCELQ5QJ74 424 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 DCST1Q5T197 706 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 PODNL1Q6PEZ8 512 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 RAD9BQ6WBX8 426 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 FAM13CQ8NE31 585 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 OR2L5Q8NG80 312 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 GABPB2Q8TAK5 448 aaPredicted RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 ZPLD1Q8TCW7 415 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 WDYHV1Q96HA8 205 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 ZFP3Q96NJ6 502 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 UGT2B28Q9BY64 529 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 TRIM54Q9BYV2 358 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 UBTD1Q9HAC8 227 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 C20orf96Q9NUD7 363 aaPredicted RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 RYDENQ9NUL5 291 aaKnown RBP10.01□□□□□ -0.81
DDX41-216ENST00000513562 SLC22A14Q9Y267 594 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 SLC6A5Q9Y345 797 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 KCNE2Q9Y6J6 123 aa10.01□□□□□ -0.81
DDX41-216ENST00000513562 SDR42E2A6NKP2 422 aa10□□□□□ -0.81
DDX41-216ENST00000513562 LDB3O75112 727 aa10□□□□□ -0.81
DDX41-216ENST00000513562 CLEC3AO75596 197 aa10□□□□□ -0.81
DDX41-216ENST00000513562 TRAPPC6AO75865 159 aa10□□□□□ -0.81
DDX41-216ENST00000513562 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
DDX41-216ENST00000513562 MLNP12872 115 aa10□□□□□ -0.81
DDX41-216ENST00000513562 PAX1P15863 534 aa10□□□□□ -0.81
DDX41-216ENST00000513562 SERPINB3P29508 390 aa10□□□□□ -0.81
DDX41-216ENST00000513562 IL2P60568 153 aa10□□□□□ -0.81
DDX41-216ENST00000513562 DMTNQ08495 405 aa10□□□□□ -0.81
DDX41-216ENST00000513562 RCAN2Q14206 197 aa10□□□□□ -0.81
DDX41-216ENST00000513562 CAPRIN1Q14444 709 aaKnown RBP10□□□□□ -0.81
DDX41-216ENST00000513562 NTRK2Q16620 822 aa10□□□□□ -0.81
DDX41-216ENST00000513562 PPP1R3AQ16821 1122 aa10□□□□□ -0.81
DDX41-216ENST00000513562 KCTD19Q17RG1 926 aaPredicted RBP10□□□□□ -0.81
DDX41-216ENST00000513562 HSP90AA5PQ58FG0 334 aa10□□□□□ -0.81
DDX41-216ENST00000513562 RBM20Q5T481 1227 aaKnown RBP10□□□□□ -0.81
DDX41-216ENST00000513562 ANKRD22Q5VYY1 191 aa10□□□□□ -0.81
DDX41-216ENST00000513562 HEPHL1Q6MZM0 1159 aa10□□□□□ -0.81
DDX41-216ENST00000513562 TRIM40Q6P9F5 258 aa10□□□□□ -0.81
DDX41-216ENST00000513562 ABHD17CQ6PCB6 329 aa10□□□□□ -0.81
DDX41-216ENST00000513562 SBSNQ6UWP8 590 aa10□□□□□ -0.81
DDX41-216ENST00000513562 TMIGD1Q6UXZ0 262 aa10□□□□□ -0.81
DDX41-216ENST00000513562 GSTA5Q7RTV2 222 aa10□□□□□ -0.81
DDX41-216ENST00000513562 KIAA1328Q86T90 577 aa10□□□□□ -0.81
DDX41-216ENST00000513562 C2CD4AQ8NCU7 369 aaPredicted RBP10□□□□□ -0.81
DDX41-216ENST00000513562 IGFBPL1Q8WX77 278 aa10□□□□□ -0.81
DDX41-216ENST00000513562 TMEM158Q8WZ71 300 aa10□□□□□ -0.81
DDX41-216ENST00000513562 CCT6BQ92526 530 aa10□□□□□ -0.81
DDX41-216ENST00000513562 SENP5Q96HI0 755 aaPredicted RBP10□□□□□ -0.81
DDX41-216ENST00000513562 REXO4Q9GZR2 422 aaKnown RBP10□□□□□ -0.81
DDX41-216ENST00000513562 PIGMQ9H3S5 423 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms