RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SERTAD2Q14140 314 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 TERF2Q15554 542 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 C4orf17Q53FE4 359 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 FRG2Q64ET8 278 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 C18orf63Q68DL7 685 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF787Q6DD87 383 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SLC25A25Q6KCM7 469 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 METTL2BQ6P1Q9 378 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 LRIG3Q6UXM1 1119 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 HSDL2Q6YN16 418 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 C16orf47Q6ZP98 133 aaPredicted RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 LGI4Q8N135 537 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CYP4Z2PQ8N1L4 340 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 RIBC1Q8N443 379 aaPredicted RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CPSF7Q8N684 471 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF321PQ8N8H1 164 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CCDC63Q8NA47 563 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 APCDD1LQ8NCL9 501 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MDS2Q8NDY4 140 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 NFAM1Q8NET5 270 aaPredicted RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 OR4F6Q8NGB9 312 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 OR14A16Q8NHC5 309 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SLC2A12Q8TD20 617 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ACMSDQ8TDX5 336 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 TRPC4APQ8TEL6 797 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 DOK4Q8TEW6 326 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SELENOMQ8WWX9 145 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ASB15Q8WXK1 588 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PPWD1Q96BP3 646 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PGM2Q96G03 612 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 RBM18Q96H35 190 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MAGED4Q96JG8 741 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 FRG2BQ96QU4 278 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 HBEGFQ99075 208 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SERPINI1Q99574 410 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CNPPD1Q9BV87 410 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 WDR41Q9HAD4 459 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 LYARQ9NX58 379 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MS4A12Q9NXJ0 267 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 KCMF1Q9P0J7 381 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM216Q9P0N5 145 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 VTI1BQ9UEU0 232 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PLEKHB1Q9UF11 243 aaPredicted RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 NPIPA1Q9UND3 350 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SLC12A4Q9UP95 1085 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ATG4BQ9Y4P1 393 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CROCCQ5TZA2 2017 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 SCN2AQ99250 2005 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 A8MVJ9 347 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 FOXO6A8MYZ6 492 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 G3V3Y1 287 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 FOXE1O00358 373 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PPP6CO00743 305 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 TFECO14948 347 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PRKNO60260 465 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 NME2P1O60361 137 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CDC40O60508 579 aaKnown RBP eCLIP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CRCPO75575 148 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 OR4F21O95013 312 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 SCELO95171 688 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 ESRRBO95718 433 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 AIFM1O95831 613 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 DDAH2O95865 285 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PDYNP01213 254 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 KLK1P06870 262 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 RPS17P08708 135 aaKnown RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 ALOX15P16050 662 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 NME2P22392 152 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 HMOX2P30519 316 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 BSGP35613 385 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 SOX3P41225 446 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 STT3AP46977 705 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 MEOX1P50221 254 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 GPR143P51810 404 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 TDGF1P3P51864 188 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CASP6P55212 293 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 HERVK_113P63132 956 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PLGLB1Q02325 96 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CLCQ05315 142 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 TRAF3Q13114 568 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CUL3Q13618 768 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CCNYL2Q5T2Q4 361 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 C6orf163Q5TEZ5 329 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 FAM219BQ5XKK7 198 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 IL20RBQ6UXL0 311 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 GPRIN3Q6ZVF9 776 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PAGE2Q7Z2X7 111 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 TRABD2AQ86V40 505 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 ZCCHC7Q8N3Z6 543 aaKnown RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CCNYL1Q8N7R7 359 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 CDYL2Q8N8U2 506 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 L3MBTL4Q8NA19 623 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 MORN4Q8NDC4 146 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 OR5L2Q8NGL0 311 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 DNAJB8Q8NHS0 232 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 WDR20Q8TBZ3 569 aa6.05□□□□□ -1.44
KDM3B-208ENST00000512928 EPS8L3Q8TE67 593 aaKnown RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF483Q8TF39 744 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 PTPMT1Q8WUK0 201 aaPredicted RBP6.05□□□□□ -1.44
KDM3B-208ENST00000512928 TANKQ92844 425 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms