RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ANKZF1Q9H8Y5 726 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ERVMER34-1Q9H9K5 563 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ZBTB20Q9HC78 741 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 SDF2L1Q9HCN8 221 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 ACKR4Q9NPB9 350 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 CCDC177Q9NQR7 707 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 PRMT7Q9NVM4 692 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 FAM118AQ9NWS6 357 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 OSER1Q9NX31 292 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 OSGIN1Q9UJX0 560 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 FBXL5Q9UKA1 691 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 CCL27Q9Y4X3 112 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 UBIAD1Q9Y5Z9 338 aa3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 SPIN1Q9Y657 262 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-208ENST00000511439 SHANK1Q9Y566 2161 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MXRA5Q9NR99 2828 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 EDDM13A0A1B0GTR0 161 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 URADA6NGE7 173 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 TMX2-CTNND1H3BSU7 103 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 I3L4J1 428 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 K7EM74 188 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 DDX39AO00148 427 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 GPAA1O43292 621 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 LRRTM2O43300 516 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 LRCH4O75427 683 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SURF6O75683 361 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SEMA4FO95754 770 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CCNE2O96020 404 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 OR2T7P0C7T2 308 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 LIFP15018 202 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MSH3P20585 1137 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 ANOS1P23352 680 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CPT2P23786 658 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 HTR1EP28566 365 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 AXLP30530 894 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SLC9A3P48764 834 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 IST1P53990 364 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CSE1LP55060 971 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PHEXP78562 749 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 NCBP1Q09161 790 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF630Q2M218 657 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 DEFB109BQ30KR1 87 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 NADK2Q4G0N4 442 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MDH1BQ5I0G3 518 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 WDR38Q5JTN6 314 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CEP85LQ5SZL2 805 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 KRT80Q6KB66 452 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PODNL1Q6PEZ8 512 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MEX3BQ6ZN04 569 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 RBPMS2Q6ZRY4 209 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SLC26A9Q7LBE3 791 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 ZFAND4Q86XD8 727 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 DCUN1D3Q8IWE4 304 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CEP57L1Q8IYX8 460 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 CPSF7Q8N684 471 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 OR5M8Q8NGP6 311 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MRPS31Q92665 395 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PRCCQ92733 491 aaPredicted RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 NXNL1Q96CM4 212 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SIPA1Q96FS4 1042 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PGLYRP2Q96PD5 576 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 LMF2Q9BU23 707 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 FNDC11Q9BVV2 318 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 TMEM206Q9H813 350 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PELI2Q9HAT8 420 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 UPF2Q9HAU5 1272 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 SPHK2Q9NRA0 654 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 GIMAP2Q9UG22 337 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 PISDQ9UG56 409 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 ACAD8Q9UKU7 415 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 NOL7Q9UMY1 257 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 GRIP1Q9Y3R0 1128 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 JRKLQ9Y4A0 524 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 TGP01266 2768 aa3.22□□□□□ -1.89
TOPBP1-208ENST00000511439 MYH6P13533 1939 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 TRAV19A0A0A6YYK7 116 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 A0A1W2PPM1 405 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 H7C0S8 307 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC9A3R1O14745 358 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SDC3O75056 442 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 SLC22A3O75751 556 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 FYNP06241 537 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 VDRP11473 427 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 FGF5P12034 268 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 CHMLP26374 656 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 MC5RP33032 325 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 TIMP3P35625 211 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 BRCC3P46736 316 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ZNF75DP51815 510 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 PDX1P52945 283 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RAD23AP54725 363 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 LINC01547P58512 204 aaPredicted RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 HNRNPKP61978 463 aaKnown RBP eCLIP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RPS18P62269 152 aaKnown RBP3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 FOLH1Q04609 750 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 RALGDSQ12967 914 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 HSPB3Q12988 150 aa3.21□□□□□ -1.9
TOPBP1-208ENST00000511439 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms