RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RIMS3Q9UJD0 308 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 RPS6KA6Q9UK32 745 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 FAF1Q9UNN5 650 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 NAALAD2Q9Y3Q0 740 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 PCDHGB2Q9Y5G2 931 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 MDC1Q14676 2089 aaKnown RBP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 H0YIG0 161 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 PRAMEF10O60809 474 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 TNFRSF21O75509 655 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 RAP2AP10114 183 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 ERFP50548 548 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 MAPK10P53779 464 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 SESN3P58005 492 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 PRR5P85299 388 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 SLC14A1Q13336 389 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 TBCELQ5QJ74 424 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 GCNT6Q5T4J0 391 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 ZC3H14Q6PJT7 736 aaKnown RBP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 ADCY4Q8NFM4 1077 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 OR4K14Q8NGD5 310 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 OR56A1Q8NGH5 318 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 NCLNQ969V3 563 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 CNRIP1Q96F85 164 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 ZNF681Q96N22 645 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 PDP2Q9P2J9 529 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 MRPS33Q9Y291 106 aaKnown RBP14.36□□□□□ -0.11
SCLT1-209ENST00000511426 CACNA1EQ15878 2313 aa14.36□□□□□ -0.11
SCLT1-209ENST00000511426 SIGLEC6O43699 453 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 SH3BP5O60239 455 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 ERAL1O75616 437 aaKnown RBP14.35□□□□□ -0.11
SCLT1-209ENST00000511426 CPNE6O95741 557 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 NCK1P16333 377 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 FASP25445 335 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 GPC1P35052 558 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 CRATP43155 626 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 HSPB3Q12988 150 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 RUNX2Q13950 521 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 ADRM1Q16186 407 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 SPDYE7PQ495Y7 208 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 C18orf63Q68DL7 685 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 TLDC1Q6P9B6 456 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 RNF111Q6ZNA4 994 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 MED25Q71SY5 747 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 PTOV1Q86YD1 416 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 GATAD2AQ86YP4 633 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 LRRC25Q8N386 305 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-209ENST00000511426 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 SLCO4A1Q96BD0 722 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 VCXQ9H320 206 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 PIF1Q9H611 641 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 FANCEQ9HB96 536 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 C3orf14Q9HBI5 128 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 CNOT11Q9UKZ1 510 aaKnown RBP14.35□□□□□ -0.11
SCLT1-209ENST00000511426 RAB23Q9ULC3 237 aa14.35□□□□□ -0.11
SCLT1-209ENST00000511426 PCDH15Q96QU1 1955 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 COL6A3P12111 3177 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 HYKKA2RU49 373 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 SYNDIG1LA6NDD5 238 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CYR61O00622 381 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 PGRMC2O15173 223 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 KIF1CO43896 1103 aaKnown RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 NTRK1P04629 796 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 FHP07954 510 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CKMT1AP12532 417 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 NELFEP18615 380 aaKnown RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 EFNA1P20827 205 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CSF2RBP32927 897 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 KDELR2P33947 212 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 MPLP40238 635 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 AVPR1BP47901 424 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CCT3P49368 545 aaKnown RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 BIKQ13323 160 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 DEFB110Q30KQ9 67 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 OGFRL1Q5TC84 451 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 NKAIN2Q5VXU1 208 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 ANGPTL8Q6UXH0 198 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 ZNF551Q7Z340 670 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-209ENST00000511426 PDSS2Q86YH6 399 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 CA13Q8N1Q1 262 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 OR4D9Q8NGE8 314 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 MIPOL1Q8TD10 442 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 GPATCH2Q9NW75 528 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 NTMQ9P121 344 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 AURKCQ9UQB9 309 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 SNX8Q9Y5X2 465 aa14.34□□□□□ -0.11
SCLT1-209ENST00000511426 LY6G6EA0A0G2JKS1 128 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 PLOD2O00469 737 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 KHNYNO15037 678 aaKnown RBP14.33□□□□□ -0.11
SCLT1-209ENST00000511426 IFNA14P01570 189 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 ARAFP10398 606 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 RNH1P13489 461 aaKnown RBP14.33□□□□□ -0.11
SCLT1-209ENST00000511426 PRIM2P49643 509 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 ARSFP54793 590 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 DSTNP60981 165 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 GNA13Q14344 377 aa14.33□□□□□ -0.11
SCLT1-209ENST00000511426 TRIP10Q15642 601 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms