RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LIM2P55344 173 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC26A5P58743 744 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 ABCE1P61221 599 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 OCRLQ01968 901 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 OC90Q02509 493 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC13A2Q13183 592 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 MEP1AQ16819 746 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 XKR7Q5GH72 579 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 ACER2Q5QJU3 275 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 C18orf63Q68DL7 685 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 DGAT2L6Q6ZPD8 337 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 QSOX2Q6ZRP7 698 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CROCCP2Q86T23 111 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 NUDCD3Q8IVD9 361 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CNPY4Q8N129 248 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 METTL4Q8N3J2 472 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 ACOT4Q8N9L9 421 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 FAM47BQ8NA70 645 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SRFBP1Q8NEF9 429 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 METTL6Q8TCB7 284 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CHTF18Q8WVB6 975 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SELENOMQ8WWX9 145 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CCDC126Q96EE4 140 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SERINC2Q96SA4 455 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 UTP23Q9BRU9 249 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CENPKQ9BS16 269 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 NPLQ9BXD5 320 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 MMP25Q9NPA2 562 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SLCO1B3Q9NPD5 702 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 NECTIN3Q9NQS3 549 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 PNO1Q9NRX1 252 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 OLAHQ9NV23 265 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 TEX10Q9NXF1 929 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 DAPP1Q9UN19 280 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 NTNG1Q9Y2I2 539 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 FIS1Q9Y3D6 152 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 ATG4BQ9Y4P1 393 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 SPACA6W5XKT8 324 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 CNTRLQ7Z7A1 2325 aa8.18□□□□□ -1.1
PDLIM5-213ENST00000509357 FLNCQ14315 2725 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 A0A1W2PR48 441 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 BLACEA4D250 179 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 AZIN1O14977 448 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PIP5K1BO14986 540 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PRAMEF2O60811 474 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 MYO1DO94832 1006 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 RASAL1O95294 804 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CBX6O95503 412 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 IFNA16P05015 189 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ENO1P06733 434 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 FGF4P08620 206 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 TNNI3P19429 210 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 TACR1P25103 407 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC1A6P48664 564 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ST13P50502 369 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 MTTPP55157 894 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 RAB38P57729 211 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PPP2R2AP63151 447 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PHEXP78562 749 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 BTKQ06187 659 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 STX4Q12846 297 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CUL3Q13618 768 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 AP5B1Q2VPB7 878 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 SH2D4BQ5SQS7 431 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 OR4C11Q6IEV9 310 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 FAM180BQ6P0A1 224 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 COMMD6Q7Z4G1 85 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CRLF3Q8IUI8 442 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 SCUBE1Q8IWY4 988 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 BEST3Q8N1M1 668 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 C1orf52Q8N6N3 182 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 HORMAD2Q8N7B1 307 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 DOK4Q8TEW6 326 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 SSC4DQ8WTU2 575 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 TWIST2Q8WVJ9 160 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 FAR1Q8WVX9 515 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ANKRD9Q96BM1 317 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CMTM7Q96FZ5 175 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 FCRL1Q96LA6 429 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 C5orf34Q96MH7 638 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 KCNC2Q96PR1 638 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PAIP2Q9BPZ3 127 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 EBPLQ9BY08 206 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 DEFB126Q9BYW3 111 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ROGDIQ9GZN7 287 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CDCP1Q9H5V8 836 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 DDX31Q9H8H2 851 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ANKRD10Q9NXR5 420 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 PSD3Q9NYI0 1048 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 HEY2Q9UBP5 337 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 MID2Q9UJV3 735 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC12A4Q9UP95 1085 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 DLGAP4Q9Y2H0 992 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms