RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 OR5AK3PQ8NH89 298 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 BBS10Q8TAM1 723 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 IPCEF1Q8WWN9 437 aaPredicted RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 PROX1Q92786 737 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 FKBP10Q96AY3 582 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 EXOSC8Q96B26 276 aaKnown RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 TM4SF19Q96DZ7 209 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 SLC35G5Q96KT7 338 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 BCL7BQ9BQE9 202 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 BTBD2Q9BX70 525 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 CHRDQ9H2X0 955 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 TRIM45Q9H8W5 580 aaPredicted RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 ZNF556Q9HAH1 456 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 C3orf14Q9HBI5 128 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 BCL2L10Q9HD36 194 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 TIMMDC1Q9NPL8 285 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 SLAMF7Q9NQ25 335 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 GPR27Q9NS67 375 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 TEX10Q9NXF1 929 aaPredicted RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 SCN3BQ9NY72 215 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 VNN3Q9NY84 501 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 SPHK1Q9NYA1 384 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 CALML5Q9NZT1 146 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 ZNF624Q9P2J8 865 aaPredicted RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 KCND3Q9UK17 655 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 ACSL6Q9UKU0 697 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 LIPT1Q9Y234 373 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 MRPS17Q9Y2R5 130 aaKnown RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 NAALAD2Q9Y3Q0 740 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 PCDHGA8Q9Y5G5 932 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 GMPPBQ9Y5P6 360 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 MAGED1Q9Y5V3 778 aaPredicted RBP8.76□□□□□ -1.01
HTT-205ENST00000509043 SNX5Q9Y5X3 404 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 LYVE1Q9Y5Y7 322 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 ZNF780BQ9Y6R6 833 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 U3KQV3 271 aa8.76□□□□□ -1.01
HTT-205ENST00000509043 NUMA1Q14980 2115 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 A0A0G2JPF8 293 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 MYOCOSA0A1B0GUC4 107 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HNRNPCL2B2RXH8 293 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HNRNPCL3B7ZW38 293 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 SLC1A7O00341 560 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CASC3O15234 703 aaKnown RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 ZSCAN9O15535 394 aaPredicted RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 PROM1O43490 865 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 TRMUO75648 421 aaKnown RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 SOX30O94993 753 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 OR6B1O95007 311 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 VIPP01282 170 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HNRNPCL4P0DMR1 293 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 NR2F6P10588 404 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ETS2P15036 469 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ITIH1P19827 911 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 PRKACGP22612 351 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 DCKP27707 260 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 AQP1P29972 269 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 TLX1P31314 330 aaPredicted RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 PIGAP37287 484 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 LIMS1P48059 325 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 NCBP2P52298 156 aaKnown RBP eCLIP8.75□□□□□ -1.01
HTT-205ENST00000509043 MAPK10P53779 464 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CRISP3P54108 245 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 TMBIM6P55061 237 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CDH15P55291 814 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 MVKQ03426 396 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CD47Q08722 323 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 NPRL3Q12980 569 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HSPB3Q12988 150 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CDK5R2Q13319 367 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 PRSS53Q2L4Q9 553 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 MLIPQ5VWP3 458 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 NIPAL1Q6NVV3 410 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ZNF793Q6ZN11 406 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 KCTD8Q6ZWB6 473 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ABHD13Q7L211 337 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ZNF605Q86T29 641 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HS3ST5Q8IZT8 346 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 GJD3Q8N144 294 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 DEPDC4Q8N2C3 294 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HORMAD2Q8N7B1 307 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 OR10G2Q8NGC3 310 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 SLC38A5Q8WUX1 472 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HMGB4Q8WW32 186 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 TMEM19Q96HH6 336 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ABHD8Q96I13 439 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 HRASLS5Q96KN8 279 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 OR2A14Q96R47 310 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 SERINC2Q96SA4 455 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 DOK1Q99704 481 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 TMEM168Q9H0V1 697 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ADNPQ9H2P0 1102 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 GLIPR2Q9H4G4 154 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 RIBC2Q9H4K1 309 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 SOX17Q9H6I2 414 aaPredicted RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 POLR1BQ9H9Y6 1135 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 CXorf21Q9HAI6 301 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 LYRM4Q9HD34 91 aa8.75□□□□□ -1.01
HTT-205ENST00000509043 ZCCHC3Q9NUD5 404 aaKnown RBP8.75□□□□□ -1.01
HTT-205ENST00000509043 NTMQ9P121 344 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms