RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LRRC14BA6NHZ5 514 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 FAM166BA8MTA8 275 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ACOT7O00154 380 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 KLK8O60259 260 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 PDE9AO76083 593 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 GLSO94925 669 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ALDOAP04075 364 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 IGKV3-11P04433 115 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 STT3AP46977 705 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 TNFRSF17Q02223 184 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 SLAMF1Q13291 335 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 PFKFB4Q16877 469 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 UBAP2Q5T6F2 1119 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 OR4C11Q6IEV9 310 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 DGAT2L6Q6ZPD8 337 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 RTL4Q6ZR62 310 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 OR4N5Q8IXE1 308 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 C9orf40Q8IXQ3 194 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ZCCHC7Q8N3Z6 543 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 GOLM1Q8NBJ4 401 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 LURAP1Q96LR2 239 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 GPR78Q96P69 363 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 COPS7AQ9UBW8 275 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 ADGRE2Q9UHX3 823 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 HCFC1P51610 2035 aa12.04□□□□□ -0.48
HMGCS1-205ENST00000508319 H0YIV9 168 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 HRKO00198 91 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 UGDHO60701 494 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 KLHL2O95198 593 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 CCL3P10147 92 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 GFAPP14136 432 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 COX7A2P14406 83 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 TNNI3P19429 210 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 RAP1GDS1P52306 607 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 ARFIP1P53367 373 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 ALDH18A1P54886 795 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 RPS13P62277 151 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 PPIAP62937 165 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 SLC7A5Q01650 507 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 PLGLB1Q02325 96 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 FOLH1Q04609 750 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 MPEG1Q2M385 716 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 EMC4Q5J8M3 183 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 LIPJQ5W064 366 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 C18orf63Q68DL7 685 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 GK5Q6ZS86 529 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 SLC22A16Q86VW1 577 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 MYLK4Q86YV6 388 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 OR5L2Q8NGL0 311 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 NUBPLQ8TB37 319 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 CA5BP1Q8WTZ4 195 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 RGMAQ96B86 450 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 MRRFQ96E11 262 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 FAM173AQ9BQD7 235 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 DEFB127Q9H1M4 99 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 TP63Q9H3D4 680 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 RPF2Q9H7B2 306 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 ACTR8Q9H981 624 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 PRM3Q9NNZ6 103 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 MS4A12Q9NXJ0 267 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 PHF11Q9UIL8 331 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 ATG4BQ9Y4P1 393 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 ANGPTL3Q9Y5C1 460 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 LIPGQ9Y5X9 500 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 NCKAP5O14513 1909 aa12.03□□□□□ -0.48
HMGCS1-205ENST00000508319 HIVEP1P15822 2718 aa12.02□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A096LPK6 155 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 A0A0A6YYD5 115 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 TMPRSS11DO60235 418 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SIX3O95343 332 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 NADKO95544 446 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 IGHG3P01860 377 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 MAGEA5P43359 124 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 DNASE1L1P49184 302 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 SERPINB8P50452 374 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 PLIN5Q00G26 463 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 FOXO1Q12778 655 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 ASPHQ12797 758 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 ACAP2Q15057 778 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 UAP1Q16222 522 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 TECRLQ5HYJ1 363 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 NDUFAF5Q5TEU4 345 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 MRM1Q6IN84 353 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 C8orf74Q6P047 294 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 OPN5Q6U736 354 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 LYPD8Q6UX82 237 aa12.02□□□□□ -0.49
HMGCS1-205ENST00000508319 RGS9BPQ6ZS82 235 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms