RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 ESRRBO95718 433 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 MYL2P10916 166 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 STT3AP46977 705 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 HLCSP50747 726 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 TDGF1P3P51864 188 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 VSNL1P62760 191 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 PLIN5Q00G26 463 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 OC90Q02509 493 aaPredicted RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 RBPJQ06330 500 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 DDX39BQ13838 428 aaKnown RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 CYP20A1Q6UW02 462 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 GPRIN3Q6ZVF9 776 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 GSPT2Q8IYD1 628 aaKnown RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 ST13P4Q8IZP2 240 aaPredicted RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 METTL4Q8N3J2 472 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 AMER2Q8N7J2 671 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 FAM47BQ8NA70 645 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 OR5L2Q8NGL0 311 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 THAP3Q8WTV1 239 aaPredicted RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 SIGLEC12Q96PQ1 595 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 MAPKAP1Q9BPZ7 522 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 ALOXE3Q9BYJ1 711 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 SIRT5Q9NXA8 310 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 WBP11Q9Y2W2 641 aaKnown RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
TTC39B-205ENST00000506891 SPENQ96T58 3664 aaKnown RBP11.3□□□□□ -0.6
TTC39B-205ENST00000506891 SPTAN1Q13813 2472 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 ARHGAP10A1A4S6 786 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 PLIN3O60664 434 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 ULK1O75385 1050 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 NEURL1O76050 574 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 GPR75O95800 540 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 PROCP04070 461 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SHBGP04278 402 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 IFNA16P05015 189 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 FAM58BPP0C7Q3 252 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 NR2F6P10588 404 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 KRT4P19013 534 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 TPP2P29144 1249 aaPredicted RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 IFFO1Q0D2I5 559 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 TBL3Q12788 808 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SPRED3Q2MJR0 410 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 UNC50Q53HI1 259 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 OR52E8Q6IFG1 317 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 LETMD1Q6P1Q0 360 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 GFRALQ6UXV0 394 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 RNF165Q6ZSG1 346 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 DND1Q8IYX4 353 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SAMD14Q8IZD0 417 aaPredicted RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SELENOMQ8WWX9 145 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 TMEM125Q96AQ2 219 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 RBM18Q96H35 190 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 NSUN5Q96P11 429 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 TMEM237Q96Q45 408 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 CSF3RQ99062 836 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 IQCGQ9H095 443 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 OXSMQ9NWU1 459 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 PSME2Q9UL46 239 aa11.29□□□□□ -0.6
TTC39B-205ENST00000506891 YARS2Q9Y2Z4 477 aaKnown RBP11.29□□□□□ -0.6
TTC39B-205ENST00000506891 SVILO95425 2214 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 G3V2L1 256 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 GOLGA8RI6L899 631 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 RTCAO00442 366 aaKnown RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 MAN1A2O60476 641 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 CPA3P15088 417 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 TNNI3P19429 210 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 MST1P26927 711 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 SERPINB5P36952 375 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 CDH13P55290 713 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 ALDH6A1Q02252 535 aaKnown RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 GALNT1Q10472 559 aaPredicted RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 SPIN4Q56A73 249 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 LIPMQ5VYY2 423 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 GALNT18Q6P9A2 607 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 MAMDC2Q7Z304 686 aaPredicted RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 TRABD2AQ86V40 505 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 SLC15A4Q8N697 577 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 POGLUT1Q8NBL1 392 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 TMEM52Q8NDY8 209 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 METTL6Q8TCB7 284 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
TTC39B-205ENST00000506891 FBXL20Q96IG2 436 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 CDK15Q96Q40 435 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 FAIM2Q9BWQ8 316 aa11.28□□□□□ -0.6
TTC39B-205ENST00000506891 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms