RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SERPINB1P30740 379 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RRM2P31350 389 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 AHRP35869 848 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RPL5P46777 297 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 NCBP2P52298 156 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIN54-206ENST00000506560 DSTNP60981 165 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 CTU2Q2VPK5 515 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 SPDYE7PQ495Y7 208 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 DEFB134Q4QY38 66 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 LAIR2Q6ISS4 152 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 TRIM40Q6P9F5 258 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 COMTD1Q86VU5 262 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 ARL10Q8N8L6 244 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 PJA1Q8NG27 643 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 OR5P2Q8WZ92 322 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RSC1A1Q92681 617 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 NEURL3Q96EH8 262 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 KCNC2Q96PR1 638 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 OR2A5Q96R48 311 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 CSF3RQ99062 836 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 CLK4Q9HAZ1 481 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 SLC35C2Q9NQQ7 365 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 A0A1W2PPC4 97 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 OR2A25A4D2G3 310 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 B4DGG1 531 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 HMGN4O00479 90 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 EIF2S1P05198 315 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 AGXTP21549 392 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 CCT3P49368 545 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 PCBP3P57721 371 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 PIGFQ07326 219 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 FADDQ13158 208 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 SIM2Q14190 667 aaPredicted RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 LTB4RQ15722 352 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 SYPL1Q16563 259 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 MEP1AQ16819 746 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 DEFB110Q30KQ9 67 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 PTCRAQ6ISU1 281 aaPredicted RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 SHQ1Q6PI26 577 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 FIGLAQ6QHK4 219 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 Q6ZPB1 254 aaPredicted RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 TMEM26Q6ZUK4 368 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 OR4N5Q8IXE1 308 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 SVOPLQ8N434 492 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 TTLQ8NG68 377 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 KLHL6Q8WZ60 621 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 TMEM19Q96HH6 336 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 QRFPRQ96P65 431 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RBM4BQ9BQ04 359 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 SARGQ9BW04 601 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RBM4Q9BWF3 364 aaKnown RBP11.54□□□□□ -0.56
LIN54-206ENST00000506560 TMEM38AQ9H6F2 299 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 TM9SF3Q9HD45 589 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 RHCGQ9UBD6 479 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 ADAM29Q9UKF5 820 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 SNX7Q9UNH6 387 aa11.54□□□□□ -0.56
LIN54-206ENST00000506560 VILLO15195 856 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 CLCN2P51788 898 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 MAZP56270 477 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 UBE2IP63279 158 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 LRRC74AQ0VAA2 488 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 TMEM35AQ53FP2 167 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 UTP15Q8TED0 518 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 ZBED6CLQ96FA7 236 aaPredicted RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 C16orf58Q96GQ5 468 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 LRRC61Q9BV99 259 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 RLIMQ9NVW2 624 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 ADPRHL2Q9NX46 363 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 THUMPD1Q9NXG2 353 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 USE1Q9NZ43 259 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 KCNE3Q9Y6H6 103 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 FAM170BA6NMN3 283 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 FAM227AF5H4B4 570 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 H3BSA7 217 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 KRT75O95678 551 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 NDUFS1P28331 727 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 GPC1P35052 558 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 GSSP48637 474 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 ITGA1P56199 1179 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 ID2Q02363 134 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 SRSF5Q13243 272 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 GANABQ14697 944 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 TEAD4Q15561 434 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 LAIR1Q6GTX8 287 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 TMEM107Q6UX40 140 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 ASPGQ86U10 573 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 UBE2FQ969M7 185 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 NMD3Q96D46 503 aaKnown RBP11.53□□□□□ -0.56
LIN54-206ENST00000506560 RIBC2Q9H4K1 309 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 RUBCNLQ9H714 662 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 HRASLS2Q9NWW9 162 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
LIN54-206ENST00000506560 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms