RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CASRP41180 1078 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 GPR143P51810 404 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 SERTAD2Q14140 314 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 NDUFAF5Q5TEU4 345 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 KANK2Q63ZY3 851 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 DGAT2L6Q6ZPD8 337 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 TRIM46Q7Z4K8 759 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 CRLF3Q8IUI8 442 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 B3GNT7Q8NFL0 401 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 DNAJB14Q8TBM8 379 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 PTPMT1Q8WUK0 201 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 TM9SF4Q92544 642 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 TM4SF18Q96CE8 201 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 LMF1Q96S06 567 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 TUBB1Q9H4B7 451 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 EPS8L2Q9H6S3 715 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 KCNK9Q9NPC2 374 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 FIS1Q9Y3D6 152 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 CCL27Q9Y4X3 112 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 WDR91A4D1P6 747 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 SYNDIG1LA6NDD5 238 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 A8MUI8 341 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 PCDH7O60245 1069 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 ZWINTO95229 277 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 STT3AP46977 705 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 BTKQ06187 659 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 SPIN4Q56A73 249 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 OR52E8Q6IFG1 317 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 Q6ZS92 163 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 ZADH2Q8N4Q0 377 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 ZNF321PQ8N8H1 164 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 NCLNQ969V3 563 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 PNPLA2Q96AD5 504 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 STMN4Q9H169 189 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 PLA2G3Q9NZ20 509 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 MCM8Q9UJA3 840 aa17.02■□□□□ 0.32
PDLIM7-216ENST00000506537 CNTRLQ7Z7A1 2325 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 BIRC5O15392 142 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 GPR75O95800 540 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 DDAH2O95865 285 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 WDPCPO95876 746 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 F10P00742 488 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 UQCRHP07919 91 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 PLA2G2AP14555 144 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 TIA1P31483 386 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 SERPINB5P36952 375 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ST13P50502 369 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 MAGOHP61326 146 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ACSM2AQ08AH3 577 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 UGT3A2Q3SY77 523 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 PLEKHN1Q494U1 663 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ACER2Q5QJU3 275 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ACSM2BQ68CK6 577 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 GALNT18Q6P9A2 607 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ZNF605Q86T29 641 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 TMEM132CQ8N3T6 1108 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 OR2T11Q8NH01 316 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 OR14A16Q8NHC5 309 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 PPWD1Q96BP3 646 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 EBPLQ9BY08 206 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 WDR41Q9HAD4 459 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 SIRT5Q9NXA8 310 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 CES1P1Q9UKY3 287 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 B3GNT3Q9Y2A9 372 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 PCDHA9Q9Y5H5 950 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 DNAJC15Q9Y5T4 150 aa17.01■□□□□ 0.31
PDLIM7-216ENST00000506537 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 TRBV11-1A0A0K0K1C0 115 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 TMEM120BA0PK00 339 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 C17orf105B2RV13 164 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 ITM2AO43736 263 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 PRKNO60260 465 aaPredicted RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 LYPLA1O75608 230 aaPredicted RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 RSL1D1O76021 490 aaKnown RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 FGF4P08620 206 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 ALOX15P16050 662 aaPredicted RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 WDR4P57081 412 aaKnown RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 TRA2BP62995 288 aaKnown RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 PLIN5Q00G26 463 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 CHI3L2Q15782 390 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 IMPG1Q17R60 797 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 PRR30Q53SZ7 412 aaPredicted RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 SPDYAQ5MJ70 313 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 SH2D4BQ5SQS7 431 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 ABHD17BQ5VST6 288 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 RNF165Q6ZSG1 346 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 BEST3Q8N1M1 668 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 CATSPER1Q8NEC5 780 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 AGR3Q8TD06 166 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 DOK4Q8TEW6 326 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 SREK1Q8WXA9 508 aaKnown RBP17■□□□□ 0.31
PDLIM7-216ENST00000506537 ARL8AQ96BM9 186 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 VMP1Q96GC9 406 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 DGAT2Q96PD7 388 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 TRIM4Q9C037 500 aa17■□□□□ 0.31
PDLIM7-216ENST00000506537 ZNF395Q9H8N7 513 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms