RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 OR4C11Q6IEV9 310 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 XKRXQ6PP77 449 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 VN1R5Q7Z5H4 357 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 MRGPRGQ86SM5 289 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 SPPL2CQ8IUH8 684 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 OR7G3Q8NG95 312 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 EPS8L3Q8TE67 593 aaKnown RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 ATP6V1E2Q96A05 226 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 CCDC120Q96HB5 630 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 ART5Q96L15 291 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 VPS11Q9H270 941 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 CHST11Q9NPF2 352 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 LGALS13Q9UHV8 139 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 PHF11Q9UIL8 331 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 TSC22D4Q9Y3Q8 395 aa9.71□□□□□ -0.86
NR1I3-222ENST00000506018 KLF2Q9Y5W3 355 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-222ENST00000506018 HMGB1P1B2RPK0 211 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 C17orf105B2RV13 164 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ACOT7O00154 380 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PRAMEF4O60810 478 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 SCELO95171 688 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 RBP1P09455 135 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 EPORP19235 508 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 AGAP20933 346 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ATP5A1P25705 553 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PTX3P26022 381 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 MEOX1P50221 254 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ST13P50502 369 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 HNRNPFP52597 415 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 DLG1Q12959 904 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 SLAMF1Q13291 335 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 GTF2H2Q13888 395 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PCBP2Q15366 365 aaKnown RBP eCLIP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 DEPDC1Q5TB30 811 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF468Q5VIY5 522 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PRAMEF9Q5VWM5 478 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ADNP2Q6IQ32 1131 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 GTF2H2CQ6P1K8 395 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PAOXQ6QHF9 649 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 CENPLQ8N0S6 344 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 CPSF7Q8N684 471 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 OR8K3Q8NH51 312 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 HUS1BQ8NHY5 278 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ACMSDQ8TDX5 336 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 DCAKDQ8WVC6 231 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 TANKQ92844 425 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 RBM18Q96H35 190 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 DGAT2Q96PD7 388 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 CSF3RQ99062 836 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 MAPKAP1Q9BPZ7 522 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 OR8D2Q9GZM6 311 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 TSPAN10Q9H1Z9 355 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 WDR41Q9HAD4 459 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 TMBIM4Q9HC24 238 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF446Q9NWS9 450 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 LYARQ9NX58 379 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 CPSF2Q9P2I0 782 aaKnown RBP9.7□□□□□ -0.86
NR1I3-222ENST00000506018 MYOTQ9UBF9 498 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 TBK1Q9UHD2 729 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 ACTL7BQ9Y614 415 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 EML6Q6ZMW3 1958 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 CENPEQ02224 2701 aa9.7□□□□□ -0.86
NR1I3-222ENST00000506018 NCOA6Q14686 2063 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 H0YIV9 168 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 PEX1O43933 1283 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 LDB3O75112 727 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SMIM24O75264 130 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SH3BGRLO75368 114 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SASH3O75995 380 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 CLDN9O95484 217 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 TBX6O95947 436 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 GPR143P51810 404 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 CCNG1P51959 295 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 IRF9Q00978 393 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 PLIN5Q00G26 463 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 C3AR1Q16581 482 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 C10orf62Q5T681 223 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SP5Q6BEB4 398 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 OPN5Q6U736 354 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 CYP20A1Q6UW02 462 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF793Q6ZN11 406 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 TIFABQ6ZNK6 161 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 Q6ZPB1 254 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 RGS9BPQ6ZS82 235 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 GPR180Q86V85 440 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SULF2Q8IWU5 870 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 ZCCHC7Q8N3Z6 543 aaKnown RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 PSD4Q8NDX1 1056 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 TMEM52Q8NDY8 209 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SCYL1Q96KG9 808 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SMC6Q96SB8 1091 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 OR51B5Q9H339 312 aa9.69□□□□□ -0.86
NR1I3-222ENST00000506018 RPF2Q9H7B2 306 aaKnown RBP9.69□□□□□ -0.86
NR1I3-222ENST00000506018 IPPKQ9H8X2 491 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms