RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CSNK2A2P19784 350 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 XCR1P46094 333 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 TEKQ02763 1124 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 CD47Q08722 323 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 SUZ12Q15022 739 aaKnown RBP16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 RD3Q7Z3Z2 195 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 KRT73Q86Y46 540 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 HORMAD2Q8N7B1 307 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 ADNPQ9H2P0 1102 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 GLIPR2Q9H4G4 154 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 CCNB1IP1Q9NPC3 277 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 GPR27Q9NS67 375 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 MS4A12Q9NXJ0 267 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 TPRKBQ9Y3C4 175 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 GMPPBQ9Y5P6 360 aa16.37■□□□□ 0.21
TRAPPC11-204ENST00000505676 E9PQ18 207 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 H0Y8X5 98 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 MBTPS2O43462 519 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZNF217O75362 1048 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 VIPP01282 170 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 ELK4P28324 431 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 MPIP34949 423 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 NCBP2P52298 156 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 SMIM11AP58511 58 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 PRR5P85299 388 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 PRRT3Q5FWE3 981 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 KCTD8Q6ZWB6 473 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 NRROSQ86YC3 692 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 ERI1Q8IV48 349 aaKnown RBP16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZNF655Q8N720 491 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 CAMKVQ8NCB2 501 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 OR4C15Q8NGM1 316 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 BBS10Q8TAM1 723 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 SLC38A5Q8WUX1 472 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 PROX1Q92786 737 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 RIBC2Q9H4K1 309 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 KLHL31Q9H511 634 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 RAB23Q9ULC3 237 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 NAALAD2Q9Y3Q0 740 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 SNX5Q9Y5X3 404 aa16.36■□□□□ 0.21
TRAPPC11-204ENST00000505676 C2orf74A8MZ97 194 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 BTN3A3O00478 584 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 FHP07954 510 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 BUD31P41223 144 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 MICAQ29983 383 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 OR8K5Q8NH50 307 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 NMD3Q96D46 503 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 TM4SF19Q96DZ7 209 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 TMEM19Q96HH6 336 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 OR2A14Q96R47 310 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 SERINC2Q96SA4 455 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 BTBD2Q9BX70 525 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 BCL2L10Q9HD36 194 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 SCN3BQ9NY72 215 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 EBF1Q9UH73 591 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 DOCK9Q9BZ29 2069 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 HEATR5BQ9P2D3 2071 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ASNA1O43681 348 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 NOL3O60936 208 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 JUNDP17535 347 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 SPIBQ01892 262 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 NPRL3Q12980 569 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 TPRG1LQ5T0D9 272 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZNF605Q86T29 641 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 OR10G2Q8NGC3 310 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 FLVCR1-AS1Q8TAF5 88 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ABCG4Q9H172 646 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZNF556Q9HAH1 456 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 C3orf14Q9HBI5 128 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZCCHC3Q9NUD5 404 aaKnown RBP16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ACTR10Q9NZ32 417 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 ZNF780BQ9Y6R6 833 aa16.35■□□□□ 0.21
TRAPPC11-204ENST00000505676 A0A1W2PR48 441 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 SHISA7A6NL88 538 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 H3BSA7 217 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 SLC1A7O00341 560 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 HMGN4O00479 90 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PROM1O43490 865 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 DIRAS1O95057 198 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 AIFM1O95831 613 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 EML2O95834 649 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 OPN1SWP03999 348 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 BCHEP06276 602 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 IGHV4-34P06331 123 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 ETS2P15036 469 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 UGT2B7P16662 529 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CRISP3P54108 245 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 IL5RAQ01344 420 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PPP1R8Q12972 351 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CDK5R2Q13319 367 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 TP53BP2Q13625 1128 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 NR4A3Q92570 626 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 HRASLS5Q96KN8 279 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 PCED1AQ9H1Q7 454 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CXorf21Q9HAI6 301 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CALML5Q9NZT1 146 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 APOBEC3BQ9UH17 382 aaKnown RBP16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 KCND3Q9UK17 655 aa16.34■□□□□ 0.21
TRAPPC11-204ENST00000505676 CES1P1Q9UKY3 287 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms