RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CNR1P21554 472 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 PTGS2P35354 604 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 ARL1P40616 181 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 GPR85P60893 370 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 RPS13P62277 151 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 ID2Q02363 134 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 CUL3Q13618 768 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 ZNF630Q2M218 657 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 OPN5Q6U736 354 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 CYP20A1Q6UW02 462 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 C16orf47Q6ZP98 133 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 RGS9BPQ6ZS82 235 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 DOLPP1Q86YN1 238 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 CTAGE4Q8IX94 777 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 ZCCHC7Q8N3Z6 543 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 ZFP62Q8NB50 900 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 SLC2A12Q8TD20 617 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 SLC44A1Q8WWI5 657 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 MTFMTQ96DP5 389 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 SCYL1Q96KG9 808 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 LURAP1Q96LR2 239 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 DGAT2Q96PD7 388 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 SORBS1Q9BX66 1292 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 NOL11Q9H8H0 719 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 DMRT3Q9NQL9 472 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 AHSPQ9NZD4 102 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 RNF11Q9Y3C5 154 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 AKAP9Q99996 3911 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 MED13LQ71F56 2210 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 NCOA6Q14686 2063 aaPredicted RBP11.1□□□□□ -0.63
MED28-203ENST00000503945 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
MED28-203ENST00000503945 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 A0A1B0GTH9 108 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 HS6ST1O60243 411 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 CDC40O60508 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
MED28-203ENST00000503945 SMIM24O75264 130 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PDE9AO76083 593 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 OR6B1O95007 311 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ETHE1O95571 254 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 GPR75O95800 540 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 CNTFP26441 200 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PTGER4P35408 488 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 RFC3P40938 356 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 STT3AP46977 705 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 NEK2P51955 445 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 CCNG1P51959 295 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PPIAP62937 165 aaKnown RBP11.09□□□□□ -0.63
MED28-203ENST00000503945 HSF1Q00613 529 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PLGLB1Q02325 96 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 MPEG1Q2M385 716 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ZNF750Q32MQ0 723 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 TTC19Q6DKK2 380 aaPredicted RBP11.09□□□□□ -0.63
MED28-203ENST00000503945 GOLGA7Q7Z5G4 137 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ZNF295-AS1Q8N0V1 137 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PLD6Q8N2A8 252 aaKnown RBP11.09□□□□□ -0.63
MED28-203ENST00000503945 RNF175Q8N4F7 328 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 L3MBTL4Q8NA19 623 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 PSD4Q8NDX1 1056 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 AGAP11Q8TF27 550 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
MED28-203ENST00000503945 PHF21BQ96EK2 531 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ART5Q96L15 291 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 FMO2Q99518 471 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 FUT8Q9BYC5 575 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 DDX31Q9H8H2 851 aaKnown RBP11.09□□□□□ -0.63
MED28-203ENST00000503945 WDR41Q9HAD4 459 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.63
MED28-203ENST00000503945 ITGB1BP2Q9UKP3 347 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 ATG4BQ9Y4P1 393 aa11.09□□□□□ -0.63
MED28-203ENST00000503945 C2CD3Q4AC94 2353 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 A0A087WUV0 522 aaPredicted RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 LRRC14BA6NHZ5 514 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 E9PLN8 166 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 PLPP1O14494 284 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 FGF17O60258 216 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 OR10H2O60403 315 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 SIX3O95343 332 aaPredicted RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 P04436 131 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 FAM58BPP0C7Q3 252 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 COX6B1P14854 86 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 PTGER1P34995 402 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 SOX3P41225 446 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 HK2P52789 917 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 IGLV3-21P80748 117 aaPredicted RBP11.08□□□□□ -0.64
MED28-203ENST00000503945 ADORA2A-AS1P86434 159 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 FOLH1Q04609 750 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 PIGGQ5H8A4 983 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 SLC22A10Q63ZE4 541 aa11.08□□□□□ -0.64
MED28-203ENST00000503945 C18orf63Q68DL7 685 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms