RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SLC35C2Q9NQQ7 365 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 PRTFDC1Q9NRG1 225 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 ATAD3AQ9NVI7 634 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 VSTM2BA6NLU5 285 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 FGF17O60258 216 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 CTNSO60931 367 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 CNOT3O75175 753 aaKnown RBP19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 SNRPB2P08579 225 aaKnown RBP19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 HSD17B7P56937 341 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 FOXL2P58012 376 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 FOLH1Q04609 750 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 MAP7Q14244 749 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 MPEG1Q2M385 716 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 MFSD4BQ5TF39 518 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 OR4F3Q6IEY1 312 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 FAM198BQ6UWH4 519 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 SHISA6Q6ZSJ9 500 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 NLGN4XQ8N0W4 816 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 ESX1Q8N693 406 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 NLGN4YQ8NFZ3 816 aaPredicted RBP19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 OR4K14Q8NGD5 310 aa19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 GPN3Q9UHW5 284 aaPredicted RBP19.18■□□□□ 0.66
CDC42SE2-206ENST00000503291 CCDC154A6NI56 674 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CCT8L1PA6NM43 557 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 C9J4A7 227 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 BRINP1O60477 761 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 C8orf89P0DMQ9 161 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CAPN3P20807 821 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CD82P27701 267 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 ID2Q02363 134 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 TIGD2Q4W5G0 525 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 POU5F2Q8N7G0 328 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CIDECQ96AQ7 238 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 ANKRD9Q96BM1 317 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CNRIP1Q96F85 164 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 OR52E6Q96RD3 313 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 BHLHE41Q9C0J9 482 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 THSD1Q9NS62 852 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 C14orf105Q9NVL8 296 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 MKL2Q9ULH7 1088 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 A0A1W2PS29 197 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 GPR75O95800 540 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 DDX5P17844 614 aaKnown RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 TCN2P20062 427 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 WNT3P56703 355 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 CYLC2Q14093 348 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 NCF4Q15080 339 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 ZNF750Q32MQ0 723 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 C6orf89Q6UWU4 347 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 SNX32Q86XE0 403 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 TMEM151BQ8IW70 566 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 RP9Q8TA86 221 aaKnown RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 TSPEARQ8WU66 669 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 PTCHD1Q96NR3 888 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 SOX17Q9H6I2 414 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 ZNF780BQ9Y6R6 833 aa19.17■□□□□ 0.66
CDC42SE2-206ENST00000503291 AHCTF1Q8WYP5 2266 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 CCDC88CQ9P219 2028 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 RAD1O60671 282 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 COX4I1P13073 169 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 MAOAP21397 527 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 PPP2R1BP30154 601 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 FEN1P39748 380 aaKnown RBP19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 XKP51811 444 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 EFNA3P52797 238 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 MAPRE2Q15555 327 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 SCUBE1Q8IWY4 988 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 CMTM5Q96DZ9 223 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 ZNF681Q96N22 645 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 SPSB2Q99619 263 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 SLC25A23Q9BV35 468 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 WDR54Q9H977 334 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 ARL8BQ9NVJ2 186 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 ACSL6Q9UKU0 697 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 MMACHCQ9Y4U1 282 aa19.16■□□□□ 0.66
CDC42SE2-206ENST00000503291 MYOCOSA0A1B0GUC4 107 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 A0A1W2PP18 115 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 SCN2BO60939 215 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 RECKO95980 971 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 EFNA1P20827 205 aaPredicted RBP19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 PCBP4P57723 403 aaKnown RBP19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 RHAGQ02094 409 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 KRT72Q14CN4 511 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 QSOX2Q6ZRP7 698 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 NATD1Q8N6N6 113 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 CT55Q8WUE5 264 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 NXPE2Q96DL1 559 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 VN1R1Q9GZP7 353 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 NECTIN3Q9NQS3 549 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 NDUFAF1Q9Y375 327 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 CLDN16Q9Y5I7 305 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 DYTNA2CJ06 578 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 TGFBR3LH3BV60 316 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 CFLARO15519 480 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 PDPK1O15530 556 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 HOXD11P31277 338 aaPredicted RBP19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 STX4Q12846 297 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 TLR1Q15399 786 aa19.15■□□□□ 0.66
CDC42SE2-206ENST00000503291 ANKRD46Q86W74 232 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms