RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CDKL3Q8IVW4 592 aaPredicted RBP4.42□□□□□ -1.7
SSR3-209ENST00000498205 ARHGAP18Q8N392 663 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 NME8Q8N427 588 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 LRRC52Q8N7C0 313 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 RBM15BQ8NDT2 890 aaKnown RBP4.42□□□□□ -1.7
SSR3-209ENST00000498205 OR5B17Q8NGF7 314 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 FAM120BQ96EK7 910 aaKnown RBP4.42□□□□□ -1.7
SSR3-209ENST00000498205 NSL1Q96IY1 281 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 CEP295NLQ96MC4 621 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 RNF157Q96PX1 679 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 SLC22A12Q96S37 553 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 DDOQ99489 341 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 PI4K2AQ9BTU6 479 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 KIFC3Q9BVG8 833 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 TSSK1BQ9BXA7 367 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 RTN4RQ9BZR6 473 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 SDCBP2Q9H190 292 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 VCXQ9H320 206 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 OSGEPL1Q9H4B0 414 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 VPS37BQ9H9H4 285 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 SLC38A7Q9NVC3 462 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 MORF4L1Q9UBU8 362 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 PLXNA1Q9UIW2 1896 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 ADAM28Q9UKQ2 775 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 ACAD8Q9UKU7 415 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 BARX2Q9UMQ3 279 aaPredicted RBP4.42□□□□□ -1.7
SSR3-209ENST00000498205 GAB2Q9UQC2 676 aa4.42□□□□□ -1.7
SSR3-209ENST00000498205 WDR90Q96KV7 1748 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 LOC100509620A0A075B734 347 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TMEM150BA6NC51 233 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 A6NCN8 305 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 SMIM1B2RUZ4 78 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 I3L4J1 428 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 CXCL11O14625 94 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 DIAPH2O60879 1101 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TM7SF2O76062 418 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 WISP2O76076 250 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 KLHL2O95198 593 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 APOEP02649 317 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MIPP30301 263 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 GARSP41250 739 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 MAGEA12P43365 314 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ACADSBP45954 432 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ACOT2P49753 483 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 NUMBP49757 651 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MMP15P51511 669 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MFAP4P55083 255 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 CD81P60033 236 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 EIF3EP60228 445 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 ACTR3P61158 418 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 SNRPEP62304 92 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 RBP5P82980 135 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MC1RQ01726 317 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MBTD1Q05BQ5 628 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 SLC34A1Q06495 639 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 LAMTOR4Q0VGL1 99 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 EPS8Q12929 822 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MFAP5Q13361 173 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 HNRNPDQ14103 355 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 DUSP28Q4G0W2 176 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TEX44Q53QW1 395 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TECRLQ5HYJ1 363 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 WDR38Q5JTN6 314 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 GCNT6Q5T4J0 391 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 C6orf163Q5TEZ5 329 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ATF7IP2Q5U623 682 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 KLC3Q6P597 504 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 CYP4V2Q6ZWL3 525 aaPredicted RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 STRADAQ7RTN6 431 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 BNIPLQ7Z465 357 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ZNF410Q86VK4 478 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 KLHDC8BQ8IXV7 354 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 STPG4Q8N801 248 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 FBXO36Q8NEA4 188 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 GDAP1Q8TB36 358 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 SPATA18Q8TC71 538 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TCP10LQ8TDR4 215 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 PRPF31Q8WWY3 499 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 DNAJC9Q8WXX5 260 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 WBP2Q969T9 261 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 HSFY1Q96LI6 401 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 OLFM3Q96PB7 478 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 F2RL3Q96RI0 385 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 CPXM1Q96SM3 734 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 EBNA1BP2Q99848 306 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 SLX1AQ9BQ83 275 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 FERMT1Q9BQL6 677 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 TMEM121Q9BTD3 319 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 HGH1Q9BTY7 390 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 RBM4Q9BWF3 364 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 TEX12Q9BXU0 123 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 MTMR12Q9C0I1 747 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 IQCGQ9H095 443 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 VCX3BQ9H321 246 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 RPF1Q9H9Y2 349 aaKnown RBP4.41□□□□□ -1.7
SSR3-209ENST00000498205 KCNK13Q9HB14 408 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 POPDC2Q9HBU9 364 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 SLCO1B3Q9NPD5 702 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 ADPRHL2Q9NX46 363 aa4.41□□□□□ -1.7
SSR3-209ENST00000498205 NDUFA13Q9P0J0 144 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms