RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RPS4Y1P22090 263 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 BMPR1AP36894 532 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 VIPR2P41587 438 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CEBPDP49716 269 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 GSK3BP49841 420 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARL4CP56559 192 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TAS2R38P59533 333 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KCNJ2P63252 427 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IGBP1P78318 339 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AMPD2Q01433 879 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MC1RQ01726 317 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SRYQ05066 204 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MXD1Q05195 221 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LTBQ06643 244 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TNFAIP1Q13829 316 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MEP1AQ16819 746 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP44Q17R89 818 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMEM35AQ53FP2 167 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PHYHD1Q5SRE7 291 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SPATA46Q5T0L3 261 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 VWA1Q6PCB0 445 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC25A47Q6Q0C1 308 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMEM108Q6UXF1 575 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NHLRC1Q6VVB1 395 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 B3GLCTQ6Y288 498 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF782Q6ZMW2 699 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 VN1R5Q7Z5H4 357 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LRRC6Q86X45 466 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 VRK2Q86Y07 508 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIF18BQ86Y91 864 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MRPL41Q8IXM3 137 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 KBTBD2Q8IY47 623 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GDPD1Q8N9F7 314 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SPPL2BQ8TCT7 592 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CEP95Q96GE4 821 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SAMD11Q96NU1 681 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR4C12Q96R67 309 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TEKT3Q9BXF9 490 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PCGF6Q9BYE7 350 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SHARPINQ9H0F6 387 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CNNM2Q9H8M5 875 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACSS1Q9NUB1 689 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM49BQ9NUQ9 324 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TDP1Q9NUW8 608 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SOHLH2Q9NX45 425 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NTMQ9P121 344 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIAA1522Q9P206 1035 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 PPP1R3CQ9UQK1 317 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 UMODL1Q5DID0 1318 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PRRC2AP48634 2157 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 DMBT1Q9UGM3 2413 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MYOM3Q5VTT5 1437 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IGKV1-27A0A075B6S5 117 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LOC105371242A0A075B767 164 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PPIAL4CA0A0B4J2A2 164 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LRRC14BA6NHZ5 514 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TTC34A8MYJ7 566 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 F5H5T6 163 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 H3BP45 60 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DDX39AO00148 427 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 BTN3A1O00481 513 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 HS3ST1O14792 307 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TBL1XO60907 577 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PMPCBO75439 489 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NEBLO76041 1014 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ABLIM3O94929 683 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GJB6O95452 261 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SNAP29O95721 258 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MOSP00540 346 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ELFN1P0C7U0 828 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PRR35P0CG20 571 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KRT5P13647 590 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AKR1B1P15121 316 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF23P17027 643 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PEBP1P30086 187 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FRKP42685 505 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC1A2P43004 574 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MAGEA8P43361 318 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KCNJ1P48048 391 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PXNP49023 591 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 RPS6KA3P51812 740 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NAPAP54920 295 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CASP9P55211 416 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 EIF3EP60228 445 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 BTN3A2P78410 334 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MPP1Q00013 466 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DEUP1Q05D60 604 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ADIGQ0VDE8 80 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GK3PQ14409 553 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLBPQ14493 270 aaKnown RBP eCLIP1.35□□□□□ -2.19
XRN1-214ENST00000498077 GANABQ14697 944 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF674Q2M3X9 581 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NDUFAF6Q330K2 333 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF829Q3KNS6 432 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM174BQ3ZCQ3 159 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACSBG2Q5FVE4 666 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RALGPS1Q5JS13 557 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ATAD3BQ5T9A4 648 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP17Q68EM7 881 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms