RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR4N5Q8IXE1 308 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 OR7A2PQ8NGA2 310 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 SNIP1Q8TAD8 396 aaKnown RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PCSK5Q92824 1860 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PTCHD1Q96NR3 888 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 DCBLD2Q96PD2 775 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 SDR39U1Q9NRG7 319 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 TCFL5Q9UL49 500 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 FARSAQ9Y285 508 aaKnown RBP12.75□□□□□ -0.37
CPNE1-227ENST00000498056 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
CPNE1-227ENST00000498056 A0A1W2PS29 197 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 WASHC1A8K0Z3 465 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 TERTO14746 1132 aaKnown RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PDPK1O15530 556 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 KLK10O43240 276 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 OR10H2O60403 315 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ALOX12BO75342 701 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 UMODP07911 640 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 C1QTNF9P0C862 333 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 DDX5P17844 614 aaKnown RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 F8A1P23610 371 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ATP4BP51164 291 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 EMP2P54851 167 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 CLDN8P56748 225 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 HSD17B7P56937 341 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 CBX1P83916 185 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PLIN5Q00G26 463 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 EEF1A2Q05639 463 aaKnown RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 IL10RAQ13651 578 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PDE7AQ13946 482 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 UGT8Q16880 541 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF385BQ569K4 471 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PAOXQ6QHF9 649 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 UNQ6494/PRO21346Q6UXR6 183 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 PIGWQ7Z7B1 504 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 DNAJB14Q8TBM8 379 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 TANKQ92844 425 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 CIDECQ96AQ7 238 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 TEX37Q96LM6 180 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 GPR87Q9BY21 358 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 NMUR2Q9GZQ4 415 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF385DQ9H6B1 395 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 NECTIN3Q9NQS3 549 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ATAD3AQ9NVI7 634 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 EHD3Q9NZN3 535 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ZIM2Q9NZV7 527 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ARMCX1Q9P291 453 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 IL17BQ9UHF5 180 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 MAPRE3Q9UPY8 281 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 EXO1Q9UQ84 846 aaKnown RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 WBP11Q9Y2W2 641 aaKnown RBP12.74□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 EXPH5Q8NEV8 1989 aa12.74□□□□□ -0.37
CPNE1-227ENST00000498056 DOCK10Q96BY6 2186 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 FCHO1O14526 889 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 SLC22A3O75751 556 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 KLF7O75840 302 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 IFNA16P05015 189 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 GPX3P22352 226 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 PTGER1P34995 402 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 FEN1P39748 380 aaKnown RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 NSDHLQ15738 373 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 ZNF750Q32MQ0 723 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 FAM174BQ3ZCQ3 159 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 AGKQ53H12 422 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 C6orf163Q5TEZ5 329 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 METTL21CQ5VZV1 264 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 GK5Q6ZS86 529 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 RAB43Q86YS6 212 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 LRRC25Q8N386 305 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 OR4K14Q8NGD5 310 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 NUDT8Q8WV74 236 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 ZCCHC14Q8WYQ9 949 aaKnown RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 MTERF3Q96E29 417 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 CNRIP1Q96F85 164 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 DGAT2Q96PD7 388 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 BBS4Q96RK4 519 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 EFHD1Q9BUP0 239 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-227ENST00000498056 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 SLC35C2Q9NQQ7 365 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 SEMA3GQ9NS98 782 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
CPNE1-227ENST00000498056 C19orf25Q9UFG5 118 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms