RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CKAP2Q8WWK9 683 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 TCP11Q8WWU5 503 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 DNASE1L2Q92874 299 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 MAPKAP1Q9BPZ7 522 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 DPEP3Q9H4B8 488 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 ABCC13Q9NSE7 274 aa2.24□□□□□ -2.05
VPS26A-208ENST00000497022 NFKBIL1Q9UBC1 381 aaPredicted RBP2.24□□□□□ -2.05
VPS26A-208ENST00000497022 CCT8L1PA6NM43 557 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 TNFSF11O14788 317 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CTDSPLO15194 276 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 DUSP11O75319 330 aaKnown RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CSO75390 466 aaKnown RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CSDE1O75534 798 aaKnown RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 RLN1P04808 185 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 FCGR3AP08637 254 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 ODC1P11926 461 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 ELK1P19419 428 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 GPX3P22352 226 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 GDF1P27539 372 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 PPP2R1BP30154 601 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 FNTAP49354 379 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CCR4P51679 360 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 SLC25A1P53007 311 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 RPL27P61353 136 aaKnown RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 MFGE8Q08431 387 aaPredicted RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 LCP2Q13094 533 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CNPY1Q3B7I2 92 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 C14orf28Q4W4Y0 310 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 HERC4Q5GLZ8 1057 aaPredicted RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 WDR25Q64LD2 544 aaPredicted RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CAPN13Q6MZZ7 669 aaPredicted RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 TRAT1Q6PIZ9 186 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 UBQLNLQ8IYU4 475 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 ZNF444Q8N0Y2 327 aaPredicted RBP2.23□□□□□ -2.05
VPS26A-208ENST00000497022 GVQW1Q8N7I0 195 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 OR1K1Q8NGR3 316 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 CCT8L2Q96SF2 557 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 TTYH2Q9BSA4 534 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 IDI2Q9BXS1 227 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 SLCO1C1Q9NYB5 712 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 SENP1Q9P0U3 644 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 GPR132Q9UNW8 380 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 PLEKHA6Q9Y2H5 1048 aa2.23□□□□□ -2.05
VPS26A-208ENST00000497022 LYPD3O95274 346 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 P0C879 139 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 P4HA1P13674 534 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 HSD17B1P14061 328 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 PGAM2P15259 253 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 GLRA1P23415 457 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 SOAT1P35610 550 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 CXCL6P80162 114 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 SLC3A1Q07837 685 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 EMC2Q15006 297 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 KIAA0040Q15053 153 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 PPP1R3AQ16821 1122 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 ISXQ2M1V0 245 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 AGAP6Q5VW22 663 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 KHDRBS2Q5VWX1 349 aaKnown RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 CASC4Q6P4E1 433 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 SIGLEC15Q6ZMC9 328 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 CYP4V2Q6ZWL3 525 aaPredicted RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 C16orf58Q96GQ5 468 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 ERO1AQ96HE7 468 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 RAB40CQ96S21 281 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 RASL10BQ96S79 203 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 BAG1Q99933 345 aaPredicted RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 WWP1Q9H0M0 922 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 IL1RL2Q9HB29 575 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 ELL3Q9HB65 397 aaPredicted RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 PLSCR3Q9NRY6 295 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 FAM212BQ9NTI7 297 aaPredicted RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 CFDP1Q9UEE9 299 aaPredicted RBP2.22□□□□□ -2.05
VPS26A-208ENST00000497022 MLXQ9UH92 298 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 MOKQ9UQ07 419 aa2.22□□□□□ -2.05
VPS26A-208ENST00000497022 ATP6AP2A0A1C7CYW4 349 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 WI2-2373I1.2A0A1W2PRP0 233 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 YDJCA8MPS7 323 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 HMGB1P1B2RPK0 211 aaPredicted RBP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 ST8SIA3O43173 380 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 SYT7O43581 403 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 KIAA0513O60268 411 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 DKC1O60832 514 aaKnown RBP eCLIP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 APOA4P06727 396 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 CCND3P30281 292 aaPredicted RBP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 OR1D2P34982 312 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 GP5P40197 560 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 RIPK4P57078 832 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 AKAP17AQ02040 695 aaKnown RBP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 TGIF1Q15583 401 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 SNRNP48Q6IEG0 339 aaKnown RBP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 ARL14Q8N4G2 192 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 UXS1Q8NBZ7 420 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 VN1R17PQ8TDU5 208 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 GANCQ8TET4 914 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 MRPL24Q96A35 216 aaKnown RBP2.21□□□□□ -2.06
VPS26A-208ENST00000497022 PNPLA2Q96AD5 504 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 PCED1BQ96HM7 432 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 ZNF285Q96NJ3 590 aa2.21□□□□□ -2.06
VPS26A-208ENST00000497022 MIS18AQ9NYP9 233 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms