RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ADPRMQ3LIE5 342 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ANKRD13BQ86YJ7 626 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 FAM20CQ8IXL6 584 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 FAM81AQ8TBF8 368 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SLC35G5Q96KT7 338 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 CSF3RQ99062 836 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RHNO1Q9BSD3 238 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 KIR3DX1Q9H7L2 352 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF556Q9HAH1 456 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PLGRKTQ9HBL7 147 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 CLEC1BQ9P126 229 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PCDHGA2Q9Y5H1 932 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SNX11Q9Y5W9 270 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ARRDC5A6NEK1 342 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 SCAMP1O15126 338 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 CCNB2O95067 398 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 EGFP01133 1207 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 CMPK1P30085 196 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 CD6P30203 668 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 NTSP30990 170 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 CTHP32929 405 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 GPC1P35052 558 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 MAP2K4P45985 399 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 GSSP48637 474 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 MASP1P48740 699 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 ENTPD1P49961 510 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 HMGA2P52926 109 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 ARFIP1P53367 373 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 HYAL2Q12891 473 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 SLC9A5Q14940 896 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 DUSP7Q16829 419 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 Q6ZPB1 254 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 PRSS48Q7RTY5 328 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 SLC44A2Q8IWA5 706 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 FBXL6Q8N531 539 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 PHF10Q8WUB8 498 aaKnown RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 APOBEC4Q8WW27 367 aaKnown RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 ASB12Q8WXK4 309 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 RAB8BQ92930 207 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 MS4A6EQ96DS6 147 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 NIPSNAP1Q9BPW8 284 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 SARGQ9BW04 601 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 KLHL31Q9H511 634 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 SCHIP1Q9P0W5 487 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 ENOPH1Q9UHY7 261 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 KCND3Q9UK17 655 aa12.37□□□□□ -0.43
GARNL3-220ENST00000496711 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-220ENST00000496711 REV3LO60673 3130 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 C4orf51C9J302 202 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 MFN2O95140 757 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 GABARAPO95166 117 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 FADS2O95864 444 aaKnown RBP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 STATHP02808 62 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 BNIP3Q12983 259 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ADAM15Q13444 863 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 LRRC32Q14392 662 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 TOR1AIP1Q5JTV8 583 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 CCDC81Q6ZN84 652 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 AHSA2Q719I0 299 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SZRD1Q7Z422 152 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ARHGAP22Q7Z5H3 698 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 TAGAPQ8N103 731 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 TMEM145Q8NBT3 493 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 OR2L5Q8NG80 312 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 RASSF5Q8WWW0 418 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 PROX1Q92786 737 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 TANKQ92844 425 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 UCN3Q969E3 161 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 UBE2FQ969M7 185 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 AMDHD1Q96NU7 426 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 GLIPR2Q9H4G4 154 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SERHL2Q9H4I8 314 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SLC35C2Q9NQQ7 365 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 SPHK1Q9NYA1 384 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 P2RX2Q9UBL9 471 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 COLEC10Q9Y6Z7 277 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 ANHXE9PGG2 379 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 MAN2B1O00754 1011 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 PCDH17O14917 1159 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 MAN1A2O60476 641 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 GUCY1B2O75343 617 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 VIPP01282 170 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 HOXC4P09017 264 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 HIST1H1TP22492 207 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-220ENST00000496711 CBLP22681 906 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 KHKP50053 298 aa12.36□□□□□ -0.43
GARNL3-220ENST00000496711 NCBP2P52298 156 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms