RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	SH3BP2	P78314	561 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TCP10	Q12799	353 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SMAD2	Q15796	467 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM44	Q2T9K0	475 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ALG11	Q2TAA5	492 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	USP39	Q53GS9	565 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C6orf136	Q5SQH8	315 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AADACL4	Q5VUY2	407 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IER5	Q5VY09	327 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ADNP2	Q6IQ32	1131 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DOK6	Q6PKX4	331 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM200A	Q86VY9	491 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPSM1	Q86YR5	675 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SERPINA12	Q8IW75	414 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM163	Q8TC26	289 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	L3HYPDH	Q96EM0	354 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HSPA12B	Q96MM6	686 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LRFN5	Q96NI6	719 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MED10	Q9BTT4	135 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLAMF8	Q9P0V8	285 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KCNMB2	Q9Y691	235 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CDH10	Q9Y6N8	788 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RNF215	Q9Y6U7	377 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ATAD5	Q96QE3	1844 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GREM1	O60565	184 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	INHA	P05111	366 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CRYBA1	P05813	215 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	G6PD	P11413	515 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ITGB8	P26012	769 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ADORA2B	P29275	332 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTS	Q03393	145 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HTR4	Q13639	388 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ERV3-1	Q14264	604 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HEPACAM	Q14CZ8	416 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SWSAP1	Q6NVH7	229 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC39A4	Q6P5W5	647 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UQCC3	Q6UW78	93 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMUB2	Q71RG4	321 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARMCX2	Q7L311	632 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PHACTR4	Q8IZ21	702 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	STK40	Q8N2I9	435 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BOLL	Q8N9W6	283 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GPR26	Q8NDV2	337 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DNER	Q8NFT8	737 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBE2F	Q969M7	185 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CYP2S1	Q96SQ9	504 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GAS2L1	Q99501	681 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FEV	Q99581	238 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SDHC	Q99643	169 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MGME1	Q9BQP7	344 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TXNL4B	Q9NX01	149 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TREM2	Q9NZC2	230 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CCNL1	Q9UK58	526 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MEIKIN	A0A087WXM9	373 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549		M0QYT0	321 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UPK1A	O00322	258 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARNTL	O00327	626 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EDN3	P14138	238 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ENG	P17813	658 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CASP6	P55212	293 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RPP30	P78346	268 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ATAT1	Q5SQI0	421 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KHDRBS2	Q5VWX1	349 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KIAA0930	Q6ICG6	404 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CXorf57	Q6NSI4	855 aa	Known RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM86B1	Q8N7N1	296 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR14A16	Q8NHC5	309 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM143	Q96AN5	459 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF408	Q9H9D4	720 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RPS6KB2	Q9UBS0	482 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZMYM5	Q9UJ78	669 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ACSL6	Q9UKU0	697 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ASF1A	Q9Y294	204 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IRAK3	Q9Y616	596 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NRAP	Q86VF7	1730 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARFGEF2	Q9Y6D5	1785 aa		7.84	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM150B	A6NC51	233 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DNASE2	O00115	360 aa	Predicted RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR10H3	O60404	316 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FADS1	O60427	444 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CDC123	O75794	336 aa	Predicted RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR4F21	O95013	312 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RAB36	O95755	333 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GLUD1	P00367	558 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OTC	P00480	354 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ADH1A	P07327	375 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PPIB	P23284	216 aa	Known RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PTPN3	P26045	913 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NOS2	P35228	1153 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FEN1	P39748	380 aa	Known RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DLX5	P56178	289 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAF1C	Q15572	869 aa	Predicted RBP	7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HFE	Q30201	348 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MANEAL	Q5VSG8	457 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RAET1G	Q6H3X3	334 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC30A6	Q6NXT4	461 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HDDC3	Q8N4P3	179 aa		7.83	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NKAP	Q8N5F7	415 aa	Known RBP	7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms