RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 RABEP2Q9H5N1 569 aa17.23■□□□□ 0.35
TSSC4-210ENST00000496468 REEP4Q9H6H4 257 aa17.23■□□□□ 0.35
TSSC4-210ENST00000496468 EHD3Q9NZN3 535 aa17.23■□□□□ 0.35
TSSC4-210ENST00000496468 C5AR2Q9P296 337 aa17.23■□□□□ 0.35
TSSC4-210ENST00000496468 C19orf25Q9UFG5 118 aaPredicted RBP17.23■□□□□ 0.35
TSSC4-210ENST00000496468 G3BP2Q9UN86 482 aaKnown RBP17.23■□□□□ 0.35
TSSC4-210ENST00000496468 ENTPD4Q9Y227 616 aa17.23■□□□□ 0.35
TSSC4-210ENST00000496468 IGKV3D-11A0A0A0MRZ8 115 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 ZNF891A8MT65 544 aaPredicted RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PCDH17O14917 1159 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PGRMC2O15173 223 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 CTNSO60931 367 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 FURINP09958 794 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PCSK2P16519 638 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 DDX5P17844 614 aaKnown RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PRPS1L1P21108 318 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 MMP11P24347 488 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PIK3R1P27986 724 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 FOXK2Q01167 660 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 ID2Q02363 134 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 SERTAD2Q14140 314 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 SSPNQ14714 243 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 RPS6KA2Q15349 733 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 NSDHLQ15738 373 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PDCD4Q53EL6 469 aaKnown RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 BROXQ5VW32 411 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 LRRC69Q6ZNQ3 347 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 LANCL3Q6ZV70 420 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 R3HCC1LQ7Z5L2 792 aaKnown RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 TICAM1Q8IUC6 712 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PLPP5Q8NEB5 264 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 UCN3Q969E3 161 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 EXOSC8Q96B26 276 aaKnown RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PPCDCQ96CD2 204 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 ELAC2Q9BQ52 826 aaKnown RBP17.22■□□□□ 0.35
TSSC4-210ENST00000496468 NECTIN3Q9NQS3 549 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 GIMAP4Q9NUV9 329 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 UTS2RQ9UKP6 389 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 PSME2Q9UL46 239 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 MAPRE3Q9UPY8 281 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 GPR45Q9Y5Y3 372 aa17.22■□□□□ 0.35
TSSC4-210ENST00000496468 TCRBV16S1A1N1A0A5B0 115 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 TGFBR3LH3BV60 316 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 ERAL1O75616 437 aaKnown RBP17.21■□□□□ 0.35
TSSC4-210ENST00000496468 COX7A2P14406 83 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 CLNS1AP54105 237 aaKnown RBP17.21■□□□□ 0.35
TSSC4-210ENST00000496468 NME5P56597 212 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 CLDN8P56748 225 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 C21orf58P58505 322 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 PLIN5Q00G26 463 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 PDE7AQ13946 482 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 UGT8Q16880 541 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 MRGPREQ86SM8 312 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 OR4N5Q8IXE1 308 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 MIER2Q8N344 545 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 KRTCAP2Q8N6L1 136 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 OR4K14Q8NGD5 310 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 ANKRD9Q96BM1 317 aaPredicted RBP17.21■□□□□ 0.35
TSSC4-210ENST00000496468 MTERF3Q96E29 417 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 ZNF764Q96H86 408 aaPredicted RBP17.21■□□□□ 0.35
TSSC4-210ENST00000496468 ZBTB18Q99592 522 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 CES1P1Q9UKY3 287 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 EXO1Q9UQ84 846 aaKnown RBP17.21■□□□□ 0.35
TSSC4-210ENST00000496468 HS3ST3B1Q9Y662 390 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 ZNF780BQ9Y6R6 833 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 SCN2AQ99250 2005 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 CCDC88CQ9P219 2028 aa17.21■□□□□ 0.35
TSSC4-210ENST00000496468 OR10H2O60403 315 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 SNX3O60493 162 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 GPR75O95800 540 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 WT1P19544 449 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 NCF2P19878 526 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 NTSP30990 170 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 IRX1P78414 480 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 IGLV3-21P80748 117 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 EEF1A2Q05639 463 aaKnown RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 SQLEQ14534 574 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ANKRD26P1Q6NSI1 321 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 TMEM205Q6UW68 189 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 PPP1R32Q7Z5V6 425 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ANKRD37Q7Z713 158 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 SAMD14Q8IZD0 417 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ZSCAN1Q8NBB4 408 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 C7orf57Q8NEG2 295 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 VPS50Q96JG6 964 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 PELOQ9BRX2 385 aaKnown RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 SDR39U1Q9NRG7 319 aaPredicted RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ATAD3AQ9NVI7 634 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ZIM2Q9NZV7 527 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 ATP6V1HQ9UI12 483 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 CLDN16Q9Y5I7 305 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 COPG1Q9Y678 874 aaKnown RBP17.2■□□□□ 0.34
TSSC4-210ENST00000496468 APC2O95996 2303 aa17.2■□□□□ 0.34
TSSC4-210ENST00000496468 CDC14CA4D256 554 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 WASHC1A8K0Z3 465 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 SOCS6O14544 535 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 ANKRD28O15084 1053 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 PDPK1O15530 556 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 TBX19O60806 448 aa17.19■□□□□ 0.34
TSSC4-210ENST00000496468 IFNA16P05015 189 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms