RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	RFX6	Q8HWS3	928 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	APLF	Q8IW19	511 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	PQLC3	Q8N755	202 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	POU5F2	Q8N7G0	328 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ADPRHL1	Q8NDY3	354 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	EXD1	Q8NHP7	514 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SPATA3	Q8NHX4	192 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	DUSP19	Q8WTR2	217 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	VPS33A	Q96AX1	596 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	HDAC11	Q96DB2	347 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC41A2	Q96JW4	573 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	OLFM3	Q96PB7	478 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	PLEKHG4B	Q96PX9	1271 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF347	Q96SE7	839 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC38A3	Q99624	504 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF670	Q9BS34	389 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	TIMM29	Q9BSF4	260 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	TEX12	Q9BXU0	123 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	POLR1E	Q9GZS1	481 aa	Known RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	THAP2	Q9H0W7	228 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ISCU	Q9H1K1	167 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	CARD9	Q9H257	536 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ACTL8	Q9H568	366 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	CXorf56	Q9H5V9	222 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	HAUS4	Q9H6D7	363 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	MLXIPL	Q9NP71	852 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	NT5M	Q9NPB1	228 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SERTAD4	Q9NUC0	356 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	POT1	Q9NUX5	634 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ARL15	Q9NXU5	204 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	ATXN10	Q9UBB4	475 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	CNOT8	Q9UFF9	292 aa	Known RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC23A2	Q9UGH3	650 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	DNPEP	Q9ULA0	475 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	A4GNT	Q9UNA3	340 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	RPL26L1	Q9UNX3	145 aa	Known RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	CHKB	Q9Y259	395 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	REXO2	Q9Y3B8	237 aa	Known RBP	4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	SESN1	Q9Y6P5	492 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981	MXRA5	Q9NR99	2828 aa		4.06	□□□□□ -1.76
VPS52-222	ENST00000495981		A0A0A0MQY5	61 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CENPVL1	A0A0U1RR11	272 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TCRBV7S3A2	A0A539	114 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OR6C68	A6NDL8	312 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ANKUB1	A6NFN9	424 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	URAD	A6NGE7	173 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OR52A4P	A6NMU1	304 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GPR89A	B7ZAQ6	455 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	C21orf140	B9A014	251 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	POLR1C	O15160	346 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TOX3	O15405	576 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ZW10	O43264	779 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	MTX2	O75431	263 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CEACAM4	O75871	244 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	RNF8	O76064	485 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	MTA2	O94776	668 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CLDN7	O95471	211 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SERPINC1	P01008	464 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CYP1A2	P05177	515 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GPR89B	P0CG08	455 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	MYBL1	P10243	752 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	EGR2	P11161	476 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GZMA	P12544	262 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	DES	P17661	470 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ACRV1	P26436	265 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	GSTM2	P28161	218 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CA5A	P35218	305 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	F2RL1	P55085	397 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TAS2R40	P59535	323 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	LTB	Q06643	244 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	DMPK	Q09013	629 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC10A2	Q12908	348 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ABR	Q12979	859 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	PEX6	Q13608	980 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	FGFBP1	Q14512	234 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	IL11RA	Q14626	422 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ICAM4	Q14773	271 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CDSN	Q15517	529 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ADIPOQ	Q15848	244 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ASIC2	Q16515	512 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ARL13A	Q5H913	290 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SERTAD4-AS1	Q5TG53	156 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	MARC1	Q5VT66	337 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ALS2CL	Q60I27	953 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TMEM198	Q66K66	360 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	PWWP2B	Q6NUJ5	590 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	AADACL2	Q6P093	401 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	DUS1L	Q6P1R4	473 aa	Known RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC2A7	Q6PXP3	512 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	FAM198B	Q6UWH4	519 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	CERS6	Q6ZMG9	384 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	TMEM26	Q6ZUK4	368 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	PRSS45	Q7RTY3	260 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	SLC9B2	Q86UD5	537 aa		4.05	□□□□□ -1.76
VPS52-222	ENST00000495981	OR8H3	Q8N146	312 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms