RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 IRAK1BP1Q5VVH5 260 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 FAM47EQ6ZV65 393 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 APLFQ8IW19 511 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 SAMD14Q8IZD0 417 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 OR4K14Q8NGD5 310 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 RBM18Q96H35 190 aaKnown RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 ING2Q9H160 280 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 ADAP2Q9NPF8 381 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 MIEF1Q9NQG6 463 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 EHD3Q9NZN3 535 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 G3BP2Q9UN86 482 aaKnown RBP16.04■□□□□ 0.16
HDAC6-235ENST00000495515 LHX6Q9UPM6 363 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 KCNMB2Q9Y691 235 aa16.04■□□□□ 0.16
HDAC6-235ENST00000495515 TCP11X1B4DZS4 312 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 DYRK3O43781 588 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 FGF17O60258 216 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 KLHL41O60662 606 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PRKRAO75569 313 aaKnown RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 TGDSO95455 350 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 LBPP18428 481 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PLIN5Q00G26 463 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 EMX2Q04743 252 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 C2orf80Q0P641 193 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PCOLCEQ15113 449 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 TERF2Q15554 542 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 ELAVL1Q15717 326 aaKnown RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 EXT1Q16394 746 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 SLC48A1Q6P1K1 146 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PAPD4Q6PIY7 484 aaKnown RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 FAM9CQ8IZT9 166 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 DNAJB14Q8TBM8 379 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 ANKRD9Q96BM1 317 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 DGAT2Q96PD7 388 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 ARHGAP9Q9BRR9 750 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 AKTIPQ9H8T0 292 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 ZNF160Q9HCG1 818 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PNO1Q9NRX1 252 aaKnown RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 GIMAP4Q9NUV9 329 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 NOP53Q9NZM5 478 aaKnown RBP16.03■□□□□ 0.16
HDAC6-235ENST00000495515 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 ZNF780BQ9Y6R6 833 aa16.03■□□□□ 0.16
HDAC6-235ENST00000495515 PTPRQQ9UMZ3 2332 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 PGRMC2O15173 223 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 OR10H2O60403 315 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 SEC24DO94855 1032 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 BCKDHAP12694 445 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 ALOX15P16050 662 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 SDC1P18827 310 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 TNNI3P19429 210 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 DDCP20711 480 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 RPL3P39023 403 aaKnown RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 MDH1P40925 334 aaKnown RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 STT3AP46977 705 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 ERVK-8P63133 956 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 IGLV3-21P80748 117 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 TBR1Q16650 682 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 IL23RQ5VWK5 629 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 FAM71E1Q6IPT2 247 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 OR4N5Q8IXE1 308 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 KBTBD2Q8IY47 623 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 ST13P4Q8IZP2 240 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 DAZLQ92904 295 aaKnown RBP16.02■□□□□ 0.16
HDAC6-235ENST00000495515 KLHL29Q96CT2 875 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 CRELD1Q96HD1 420 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 C1orf50Q9BV19 199 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 ASIC5Q9NY37 505 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 GIMAP2Q9UG22 337 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 UTS2RQ9UKP6 389 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.16
HDAC6-235ENST00000495515 DMXL2Q8TDJ6 3036 aa16.02■□□□□ 0.15
HDAC6-235ENST00000495515 ZZEF1O43149 2961 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 IGHV3-20A0A0C4DH32 117 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 SDHDO14521 159 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 ERAL1O75616 437 aaKnown RBP16.01■□□□□ 0.15
HDAC6-235ENST00000495515 SERPINA7P05543 415 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 PRR35P0CG20 571 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 SLC35E2P0CK97 266 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 CSNK2A2P19784 350 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-235ENST00000495515 XKP51811 444 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 GUCY1A3Q02108 690 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 ID2Q02363 134 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 PLAG1Q6DJT9 500 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 OGFOD2Q6N063 350 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 RIPOR1Q6ZS17 1223 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 ACAD11Q709F0 780 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 R3HCC1LQ7Z5L2 792 aaKnown RBP16.01■□□□□ 0.15
HDAC6-235ENST00000495515 LIX1Q8N485 282 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 OR14A16Q8NHC5 309 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC6-235ENST00000495515 EXTL1Q92935 676 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 IMMP1LQ96LU5 166 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 TSSK3Q96PN8 268 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 MESP1Q9BRJ9 268 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 SIKE1Q9BRV8 207 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 CCDC134Q9H6E4 229 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 HEY2Q9UBP5 337 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 CES1P1Q9UKY3 287 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 MAPRE3Q9UPY8 281 aa16.01■□□□□ 0.15
HDAC6-235ENST00000495515 ENTPD4Q9Y227 616 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms