RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ANKRD9Q96BM1 317 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 SLX1AQ9BQ83 275 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF717Q9BY31 904 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 KLHL1Q9NR64 748 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 MID2Q9UJV3 735 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 YARS2Q9Y2Z4 477 aaKnown RBP16.44■□□□□ 0.22
HDAC4-211ENST00000494800 ASB4Q9Y574 426 aa16.44■□□□□ 0.22
HDAC4-211ENST00000494800 SCN2AQ99250 2005 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 MYOCOSA0A1B0GUC4 107 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 TLDC2A0PJX2 215 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 H3BQF6 201 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 PPP6CO00743 305 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 OR10H2O60403 315 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ULK1O75385 1050 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ITGA10O75578 1167 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SLC25A12O75746 678 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 GPR75O95800 540 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 PDYNP01213 254 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ENO1P06733 434 aaKnown RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 KLK1P06870 262 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SP1P08047 785 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ALOX15P16050 662 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 KRT4P19013 534 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 CRHR1P34998 444 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SSR4P51571 173 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 GPR143P51810 404 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 IGLV3-21P80748 117 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 CSTF3Q12996 717 aaKnown RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 CFAP157Q5JU67 520 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 OR52E8Q6IFG1 317 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SLC25A25Q6KCM7 469 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 WDR93Q6P2C0 686 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ZYG11AQ6WRX3 759 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 OR4N5Q8IXE1 308 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 ST13P4Q8IZP2 240 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 METTL4Q8N3J2 472 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 CCNYL1Q8N7R7 359 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 OR8K3Q8NH51 312 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 SCMH1Q96GD3 660 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 TAAR6Q96RI8 345 aa16.43■□□□□ 0.22
HDAC4-211ENST00000494800 MRPL1Q9BYD6 325 aaKnown RBP16.43■□□□□ 0.22
HDAC4-211ENST00000494800 A0A1W2PR48 441 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 ESPNB1AK53 854 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 NEURL1O76050 574 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 GBAP04062 536 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 NUDT17P0C025 328 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 MAPK12P53778 367 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 MAPKAPK3Q16644 382 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 GPALPP1Q8IXQ4 340 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 GBP7Q8N8V2 638 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-211ENST00000494800 TRIM45Q9H8W5 580 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-211ENST00000494800 FARSBQ9NSD9 589 aaKnown RBP16.42■□□□□ 0.22
HDAC4-211ENST00000494800 VPS29Q9UBQ0 182 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 ERVK-11Q9UQG0 969 aa16.42■□□□□ 0.22
HDAC4-211ENST00000494800 A0A1B0GTL3 188 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 GLOD5A6NK44 160 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 MANBAO00462 879 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 CRCPO75575 148 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ESRRBO95718 433 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 AIFM1O95831 613 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 PROCP04070 461 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 PIK3R1P27986 724 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ST13P50502 369 aaKnown RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 C6orf163Q5TEZ5 329 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF324BQ6AW86 544 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 SH2D5Q6ZV89 423 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 COMMD6Q7Z4G1 85 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 GALNTL5Q7Z4T8 443 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 CYP4Z2PQ8N1L4 340 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 SSC4DQ8WTU2 575 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ASB15Q8WXK1 588 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 RIT1Q92963 219 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ROPN1BQ9BZX4 212 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ROPN1Q9HAT0 212 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 TIMMDC1Q9NPL8 285 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 MYOTQ9UBF9 498 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 ZNF223Q9UK11 482 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 EMCNQ9ULC0 261 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 SLC5A6Q9Y289 635 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 KLF13Q9Y2Y9 288 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 PRRC2CQ9Y520 2896 aaKnown RBP16.41■□□□□ 0.22
HDAC4-211ENST00000494800 NBASA2RRP1 2371 aa16.41■□□□□ 0.22
HDAC4-211ENST00000494800 SHANK1Q9Y566 2161 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 A8MVJ9 347 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 G3V2L1 256 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 KLRC4-KLRK1H3BQV0 150 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 NME2P1O60361 137 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 PLIN3O60664 434 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 PRKRAO75569 313 aaKnown RBP16.4■□□□□ 0.22
HDAC4-211ENST00000494800 OR2J2O76002 312 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 DDAH2O95865 285 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 SLC35E2P0CK97 266 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 CPA3P15088 417 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 NME2P22392 152 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 GALNSP34059 522 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 DNAJB13P59910 316 aa16.4■□□□□ 0.22
HDAC4-211ENST00000494800 RNF4P78317 190 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms