RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 RPS13P62277 151 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TNFRSF17Q02223 184 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 CAV1Q03135 178 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 FOLH1Q04609 750 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TGM3Q08188 693 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 NAB1Q13506 487 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 UAP1Q16222 522 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TMEM35AQ53FP2 167 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TECRLQ5HYJ1 363 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 C8orf74Q6P047 294 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 MYLK4Q86YV6 388 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 MORN4Q8NDC4 146 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 OR2M7Q8NG81 312 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 RHEBL1Q8TAI7 183 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 PHF10Q8WUB8 498 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 ASB15Q8WXK1 588 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 DAZLQ92904 295 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 PPWD1Q96BP3 646 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 MTFMTQ96DP5 389 aaKnown RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 CMTM7Q96FZ5 175 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TTTY12Q9BZ98 90 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 DEFB127Q9H1M4 99 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TIMMDC1Q9NPL8 285 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 SEMA4BQ9NPR2 832 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-208ENST00000494728 HPF1Q9NWY4 346 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 TNFRSF10DQ9UBN6 386 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 PPT2Q9UMR5 302 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 ERVK-11Q9UQG0 969 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 ACOT9Q9Y305 439 aa10.78□□□□□ -0.68
VTI1A-208ENST00000494728 MED13LQ71F56 2210 aa10.77□□□□□ -0.68
VTI1A-208ENST00000494728 A0A087X1B8 175 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 A0A096LPK6 155 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 A0A0A6YYD5 115 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 A0A1B0GTL3 188 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 GLOD5A6NK44 160 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 E9PLN8 166 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 PRRG2O14669 202 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 CLPSP04118 112 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 COX6B1P14854 86 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 EPB42P16452 691 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 ECHS1P30084 290 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 BSGP35613 385 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 MAGEA12P43365 314 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 STT3AP46977 705 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 DNASE1L1P49184 302 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 NEK2P51955 445 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 SMSP52788 366 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 FOXO1Q12778 655 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 SLAMF1Q13291 335 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 GTF2H2Q13888 395 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 HIST2H2ACQ16777 129 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 DEPDC1Q5TB30 811 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 HIST2H2AA3Q6FI13 130 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 OR4C11Q6IEV9 310 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 GTF2H2CQ6P1K8 395 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 RPS27LQ71UM5 84 aaKnown RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 GDF7Q7Z4P5 450 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 ACBD4Q8NC06 268 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 OR52B6Q8NGF0 335 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 WDR20Q8TBZ3 569 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 SDCCAG3Q96C92 435 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 LURAP1Q96LR2 239 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 NSUN5Q96P11 429 aaKnown RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 CDK15Q96Q40 435 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 VKORC1Q9BQB6 163 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 ROGDIQ9GZN7 287 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 ACSS3Q9H6R3 686 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 ZDHHC11Q9H8X9 412 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 CPSF2Q9P2I0 782 aaKnown RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
VTI1A-208ENST00000494728 RNF11Q9Y3C5 154 aa10.77□□□□□ -0.69
VTI1A-208ENST00000494728 A0A1W2PR48 441 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ENO4A6NNW6 628 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 OR7A17O14581 309 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 KLHL2O95198 593 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 LRATO95237 230 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 AIFM1O95831 613 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 GBAP04062 536 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 GFAPP14136 432 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 TNNI3P19429 210 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PTGER4P35408 488 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PIK3CBP42338 1070 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 MAGEA5P43359 124 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 SERPINB8P50452 374 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 RAP1GDS1P52306 607 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ALDH18A1P54886 795 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PPIAP62937 165 aaKnown RBP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 ASPHQ12797 758 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 SERTAD2Q14140 314 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 RCN2Q14257 317 aa10.76□□□□□ -0.69
VTI1A-208ENST00000494728 PCBP2Q15366 365 aaKnown RBP eCLIP10.76□□□□□ -0.694e-7■■■■■ 39.6
VTI1A-208ENST00000494728 CPSF6Q16630 551 aaKnown RBP eCLIP10.76□□□□□ -0.69
VTI1A-208ENST00000494728 MRM1Q6IN84 353 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms