RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 TAC3Q9UHF0 121 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 ADGRE2Q9UHX3 823 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 MKL2Q9ULH7 1088 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 TRIM33Q9UPN9 1127 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 ARL2BPQ9Y2Y0 163 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 MEMO1Q9Y316 297 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 PCDHGA11Q9Y5H2 935 aa11.03□□□□□ -0.64
CSNK1E-212ENST00000494610 AKAP6Q13023 2319 aa11.02□□□□□ -0.64
CSNK1E-212ENST00000494610 LOC102723996A0A087X1L8 192 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 OR2A25A4D2G3 310 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 OR7A17O14581 309 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 DCTN3O75935 186 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 OR4F21O95013 312 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 KITP10721 976 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 HSD3B1P14060 373 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 HSD3B2P26439 372 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 CCR8P51685 355 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 NR0B1P51843 470 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ARFIP2P53365 341 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 CSNK1G2P78368 415 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 TUBA3CQ13748 450 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 DSG2Q14126 1118 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 E2F2Q14209 437 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 MUM1Q2TAK8 710 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 C18orf21Q32NC0 220 aaPredicted RBP11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ABHD17BQ5VST6 288 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 CES4AQ5XG92 561 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ICE2Q659A1 982 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 TUBA3EQ6PEY2 450 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 TMEM205Q6UW68 189 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 FGD2Q7Z6J4 655 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 CSNK1A1LQ8N752 337 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 PPFIBP2Q8ND30 876 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 OR52B6Q8NGF0 335 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 DNAJB8Q8NHS0 232 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 METTL6Q8TCB7 284 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 AGR3Q8TD06 166 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 TWIST2Q8WVJ9 160 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 VPS50Q96JG6 964 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ELAC2Q9BQ52 826 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 C20orf27Q9GZN8 174 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ELOVL6Q9H5J4 265 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 MRPS30Q9NP92 439 aaKnown RBP11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ZDHHC2Q9UIJ5 367 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 ASB1Q9Y576 335 aa11.02□□□□□ -0.65
CSNK1E-212ENST00000494610 PRRC2AP48634 2157 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 A0A0G2JND7 137 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 A0A1W2PQ72 361 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 H0YIV9 168 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 SLC28A1O00337 649 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 UBFD1O14562 309 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ADAM10O14672 748 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ULK1O75385 1050 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 C1GALT1C1LP0DN25 315 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 NPPBP16860 134 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 TSPAN8P19075 237 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 SSTR2P30874 369 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ARRB2P32121 409 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 CD96P40200 585 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 AQP5P55064 265 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 RBPJQ06330 500 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 PRDX1Q06830 199 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 CSTF3Q12996 717 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 TERF2Q15554 542 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 PDCD2Q16342 344 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 BTBD16Q32M84 506 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ACER2Q5QJU3 275 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ZNF468Q5VIY5 522 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 MED27Q6P2C8 311 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 NXPE4Q6UWF7 544 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 SPNS3Q6ZMD2 512 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 MEX3BQ6ZN04 569 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 RPS27LQ71UM5 84 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 PAQR7Q86WK9 346 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 DDIASQ8IXT1 998 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 CDYL2Q8N8U2 506 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 GBP7Q8N8V2 638 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 MDS2Q8NDY4 140 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 ABHD11Q8NFV4 315 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 OR9A4Q8NGU2 314 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 SUN3Q8TAQ9 357 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 NEIL2Q969S2 332 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 MAGED4Q96JG8 741 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 GPR137Q96N19 417 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 OR2A5Q96R48 311 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 OR4K3Q96R72 315 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 VN1R1Q9GZP7 353 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 MEAF6Q9HAF1 191 aa11.01□□□□□ -0.65
CSNK1E-212ENST00000494610 PRM3Q9NNZ6 103 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms