RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SUPT3HO75486 399 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 GLSO94925 669 aaPredicted RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 ETHE1O95571 254 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 CCDC166P0CW27 439 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 DRD2P14416 443 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 GABRA1P14867 456 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 GDF1P27539 372 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ARL1P40616 181 aaPredicted RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 WNT3P56703 355 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 PLIN5Q00G26 463 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 LAPTM5Q13571 262 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 FASTKD3Q14CZ7 662 aaKnown RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 SLC22A10Q63ZE4 541 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 STEAP4Q687X5 459 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 RTL6Q6ICC9 239 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SULT1C3Q6IMI6 304 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 RAPH1Q70E73 1250 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SLC29A4Q7RTT9 530 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 VN1R5Q7Z5H4 357 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ZBED8Q8IZ13 594 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ACOT4Q8N9L9 421 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ANKRD7Q92527 254 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 CDKL2Q92772 493 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 LRRC39Q96DD0 335 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 TSPAN17Q96FV3 270 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 WDR83Q9BRX9 315 aaKnown RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 CENPKQ9BS16 269 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 DOHHQ9BU89 302 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SORBS1Q9BX66 1292 aaKnown RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 PITHD1Q9GZP4 211 aaPredicted RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 RHOJQ9H4E5 214 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 PLAC1Q9HBJ0 212 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 LYRM4Q9HD34 91 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 TRMT1Q9NXH9 659 aaKnown RBP8.89□□□□□ -0.99
UBR4-216ENST00000494503 NSMCE4AQ9NXX6 385 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 CRIM1Q9NZV1 1036 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SPRR3Q9UBC9 169 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ST6GALNAC2Q9UJ37 374 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 SNX12Q9UMY4 172 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 ANGPTL3Q9Y5C1 460 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 CLDN16Q9Y5I7 305 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 TEX264Q9Y6I9 313 aa8.89□□□□□ -0.99
UBR4-216ENST00000494503 HSPB2A8KAH6 182 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 EEF1E1-BLOC1S5C9J1V9 151 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 TAPBPO15533 448 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 EEF1E1O43324 174 aaKnown RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 FGF17O60258 216 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 HCN1O60741 890 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZNF354AO60765 605 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 PRKRAO75569 313 aaKnown RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 CTAG2O75638 210 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 IGHG3P01860 377 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 STMN1P16949 149 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 TACR1P25103 407 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ATP5A1P25705 553 aaKnown RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 TLX1P31314 330 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 MASP1P48740 699 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 DLX5P56178 289 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 HERVK_113P63132 956 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ERVK-8P63133 956 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 SLAMF1Q13291 335 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZNF267Q14586 743 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 SLMAPQ14BN4 828 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 HSPB2Q16082 182 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ADPRMQ3LIE5 342 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 MED27Q6P2C8 311 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZNF793Q6ZN11 406 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 RNF111Q6ZNA4 994 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 TGIF2LYQ8IUE0 185 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 CTAGE3PQ8IX95 158 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 C9orf40Q8IXQ3 194 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 OR10G3Q8NGC4 313 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 OR8K3Q8NH51 312 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZNF721Q8TF20 911 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 DIO2Q92813 273 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 NINJ1Q92982 152 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 UBE2E3Q969T4 207 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 SPACA9Q96E40 222 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 SENP5Q96HI0 755 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 ART5Q96L15 291 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 FOXC2Q99958 501 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 TBCDQ9BTW9 1192 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ERVK-6Q9BXR3 956 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 DERL2Q9GZP9 239 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 OR51B5Q9H339 312 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 EHD1Q9H4M9 534 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 RPF2Q9H7B2 306 aaKnown RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZNF703Q9H7S9 590 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 NT5DC2Q9H857 520 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ZFP64Q9NPA5 681 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 PRDM7Q9NQW5 492 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.88□□□□□ -0.992e-7■■□□□ 14.3
UBR4-216ENST00000494503 ZNF490Q9ULM2 529 aaPredicted RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 CAMK2AQ9UQM7 478 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
UBR4-216ENST00000494503 MTO1Q9Y2Z2 717 aaKnown RBP8.88□□□□□ -0.99
UBR4-216ENST00000494503 A0A1B0GVC2 190 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms