RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 OR4N5Q8IXE1 308 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 ZCCHC7Q8N3Z6 543 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 RBMXL3Q8N7X1 1067 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 PPP1R14CQ8TAE6 165 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 M1APQ8TC57 530 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 TCP10LQ8TDR4 215 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 AGAP11Q8TF27 550 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 KCNA7Q96RP8 456 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 WDR77Q9BQA1 342 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 MECRQ9BV79 373 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 ALOXE3Q9BYJ1 711 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 RPF2Q9H7B2 306 aaKnown RBP9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 KCNK9Q9NPC2 374 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 OXSMQ9NWU1 459 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 MS4A12Q9NXJ0 267 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 PSD3Q9NYI0 1048 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 PLA2G3Q9NZ20 509 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 SENP1Q9P0U3 644 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 ABI3Q9P2A4 366 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 ZNF225Q9UK10 706 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 ATG4BQ9Y4P1 393 aa9.74□□□□□ -0.85
TRAPPC12-222ENST00000493792 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 A0A0A6YYD5 115 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 GOLGA6L10A6NI86 522 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 TGFBR3LH3BV60 316 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 UBFD1O14562 309 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CTIFO43310 598 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 FGF17O60258 216 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 SCELO95171 688 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 NEFHP12036 1026 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 COX7A2P14406 83 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CHN1P15882 459 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 SERPINB3P29508 390 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 ARFIP1P53367 373 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 MAPK12P53778 367 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CSTF3Q12996 717 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 SERTAD2Q14140 314 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 INPP5JQ15735 1006 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CROCCP2Q86T23 111 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 TMEM132CQ8N3T6 1108 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 KIF2BQ8N4N8 673 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 SLC5A8Q8N695 610 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 C1orf52Q8N6N3 182 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 PSMF1Q92530 271 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 ZNF354BQ96LW1 612 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 DGAT2Q96PD7 388 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 LMF1Q96S06 567 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 GATA5Q9BWX5 397 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 DEFB126Q9BYW3 111 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 DDX31Q9H8H2 851 aaKnown RBP9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 BRF2Q9HAW0 419 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 ADAP2Q9NPF8 381 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 STMN3Q9NZ72 180 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 VPS29Q9UBQ0 182 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 PPT2Q9UMR5 302 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 B3GNT3Q9Y2A9 372 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CSAG2Q9Y5P2 127 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 CLCA3PQ9Y6N3 262 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 DOCK10Q96BY6 2186 aa9.73□□□□□ -0.85
TRAPPC12-222ENST00000493792 TRBV11-1A0A0K0K1C0 115 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 A0A1W2PR48 441 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 SYNDIG1LA6NDD5 238 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 PROM1O43490 865 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 DYRK3O43781 588 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 OR10H2O60403 315 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 GUCY1B2O75343 617 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 AIFM1O95831 613 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 PRF1P14222 555 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 SOX11P35716 441 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 ALDH9A1P49189 494 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 FOXA1P55317 472 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 HMGCS1Q01581 520 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 OC90Q02509 493 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 FOLH1Q04609 750 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 ACSM2AQ08AH3 577 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 ELAVL1Q15717 326 aaKnown RBP9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 PLEKHN1Q494U1 663 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 ACSM2BQ68CK6 577 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 IGFL3Q6UXB1 125 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 LRIG3Q6UXM1 1119 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 ZCCHC23Q6ZST2 131 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 CRLF3Q8IUI8 442 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 IQCKQ8N0W5 287 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 BEST3Q8N1M1 668 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 METTL4Q8N3J2 472 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 Q8NA96 180 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 CATSPER1Q8NEC5 780 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 B3GNT7Q8NFL0 401 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 OR1N1Q8NGS0 311 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 CDC26Q8NHZ8 85 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 SUN3Q8TAQ9 357 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 AGR3Q8TD06 166 aa9.72□□□□□ -0.85
TRAPPC12-222ENST00000493792 THAP3Q8WTV1 239 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms