RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 RIMKLAQ8IXN7 391 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 FAM47BQ8NA70 645 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 OR4K14Q8NGD5 310 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.7□□□□□ -0.54
SNX17-208ENST00000493711 LRRC37BQ96QE4 947 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 CLMPQ9H6B4 373 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 SAR1AQ9NR31 198 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 PRTFDC1Q9NRG1 225 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
SNX17-208ENST00000493711 G3BP2Q9UN86 482 aaKnown RBP11.7□□□□□ -0.54
SNX17-208ENST00000493711 FARSAQ9Y285 508 aaKnown RBP11.7□□□□□ -0.54
SNX17-208ENST00000493711 PCDHGA6Q9Y5G7 932 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 ZNF780BQ9Y6R6 833 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
SNX17-208ENST00000493711 PCM1Q15154 2024 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 FCHO1O14526 889 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 AKAP10O43572 662 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 B4GALT2O60909 372 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 RECKO95980 971 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 HEXBP07686 556 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
SNX17-208ENST00000493711 TCN2P20062 427 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 GPX3P22352 226 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 PIK3R1P27986 724 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 NTSP30990 170 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 MPIP34949 423 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 FOLR3P41439 243 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 KCNK10P57789 538 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 STX4Q12846 297 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 SF3A3Q12874 501 aaKnown RBP eCLIP11.69□□□□□ -0.543e-6■■■□□ 16.5
SNX17-208ENST00000493711 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 DNASE1L3Q13609 305 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 SYT16Q17RD7 645 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 MINDY4Q4G0A6 757 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 MFSD4BQ5TF39 518 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 C18orf63Q68DL7 685 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 MTDHQ86UE4 582 aaKnown RBP11.69□□□□□ -0.54
SNX17-208ENST00000493711 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 SCUBE1Q8IWY4 988 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 DTWD1Q8N5C7 304 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 IL22RA1Q8N6P7 574 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 PLPP5Q8NEB5 264 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 OR2Y1Q8NGV0 311 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CLHC1Q8NHS4 586 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CT55Q8WUE5 264 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 METTL21AQ8WXB1 218 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 FGF11Q92914 225 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 NKD1Q969G9 470 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 KLHL29Q96CT2 875 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 COQ8BQ96D53 544 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 EGLN2Q96KS0 407 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 BHLHE41Q9C0J9 482 aaPredicted RBP11.69□□□□□ -0.54
SNX17-208ENST00000493711 SLC35C2Q9NQQ7 365 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 SEMA3GQ9NS98 782 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CTSFQ9UBX1 484 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 C19orf25Q9UFG5 118 aaPredicted RBP11.69□□□□□ -0.54
SNX17-208ENST00000493711 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 MKL2Q9ULH7 1088 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 ENTPD4Q9Y227 616 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
SNX17-208ENST00000493711 CNOT1A5YKK6 2376 aaKnown RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 GABRR3A8MPY1 467 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 FAM227AF5H4B4 570 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 PGRMC2O15173 223 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 CFLARO15519 480 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 PDPK1O15530 556 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 DYRK3O43781 588 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 DNAJB6O75190 326 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 SLITRK5O94991 958 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 LRATO95237 230 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 SLC35E2P0CK97 266 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 PTPN4P29074 926 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 S100A3P33764 101 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 GALNSP34059 522 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 KIR3DL1P43629 444 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 POLR2JP52435 117 aaKnown RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 EMP2P54851 167 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 UFM1P61960 85 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 IGLV3-21P80748 117 aaPredicted RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 CBX1P83916 185 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 RHAGQ02094 409 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 VWA2Q5GFL6 755 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 FAM199XQ6PEV8 388 aaPredicted RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 ENDOVQ8N8Q3 282 aaKnown RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 OR8J2Q8NGG1 315 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 DNAJB8Q8NHS0 232 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 ZBED6CLQ96FA7 236 aaPredicted RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 RBM18Q96H35 190 aaKnown RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 MARK4Q96L34 752 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 PTCHD1Q96NR3 888 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 IP6K3Q96PC2 410 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 BBS4Q96RK4 519 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 CSF3RQ99062 836 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 SPSB2Q99619 263 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms