RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 CBLBQ13191 982 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 MYBPHQ13203 477 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ZKSCAN8Q15776 578 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 TBCCQ15814 346 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 MPEG1Q2M385 716 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 TMEM35AQ53FP2 167 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 CES4AQ5XG92 561 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 MED27Q6P2C8 311 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 B3GNT6Q6ZMB0 384 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 RAPH1Q70E73 1250 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 CHSY3Q70JA7 882 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 TRILQ7L0X0 811 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 LRRC70Q7Z2Q7 622 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 CLYBLQ8N0X4 340 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 PPM1NQ8N819 430 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 C7orf57Q8NEG2 295 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ZNF721Q8TF20 911 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ZNF473Q8WTR7 871 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 UBE2E3Q969T4 207 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ANKRD9Q96BM1 317 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 UBXN10Q96LJ8 280 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 DGAT2Q96PD7 388 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ALG9Q9H6U8 611 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 LDAHQ9H6V9 325 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 TUBA8Q9NY65 449 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 KCNN3Q9UGI6 736 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 ACAD8Q9UKU7 415 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 FAM215AQ9Y5M1 114 aa9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 NIPBLQ6KC79 2804 aaeCLIP9.49□□□□□ -0.89
NUDCD3-210ENST00000493613 KIAA1549Q9HCM3 1950 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 ZFHX3Q15911 3703 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 A0A0G2JNJ9 132 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 FAM187AA6NFU0 413 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SUPT3HB4E1H0 165 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 EIF3HO15372 352 aaKnown RBP eCLIP9.48□□□□□ -0.897e-7■■■□□ 16.9
NUDCD3-210ENST00000493613 RAD51CO43502 376 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 DYRK3O43781 588 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 FGF17O60258 216 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 KLK8O60259 260 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 WDR1O75083 606 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SUPT3HO75486 399 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 FAM155BO75949 473 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SCELO95171 688 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 GLI4P10075 376 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CD1EP15812 388 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SPRP35270 261 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 PIGAP37287 484 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CASP2P42575 452 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 STT3AP46977 705 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 ZFP36L2P47974 494 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 PLTPP55058 493 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 GPX6P59796 221 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 KCNJ2P63252 427 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 IGLV3-21P80748 117 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 FOXO1Q12778 655 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 E2F2Q14209 437 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SLC10A1Q14973 349 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SLMAPQ14BN4 828 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 HYAL4Q2M3T9 481 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 PIGGQ5H8A4 983 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 GRTP1Q5TC63 336 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 KHDRBS2Q5VWX1 349 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 RTL6Q6ICC9 239 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 OR4C11Q6IEV9 310 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CYS1Q717R9 158 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 MAATS1Q7Z4T9 603 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CMC1Q7Z7K0 106 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 ISCA2Q86U28 154 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CCDC25Q86WR0 208 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 OR4N5Q8IXE1 308 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 C9orf40Q8IXQ3 194 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 LAS2Q8IYD9 372 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SPATA4Q8NEY3 305 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 OR7G3Q8NG95 312 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 NUBPLQ8TB37 319 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 STAG3L4Q8TBR4 150 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SLC22A8Q8TCC7 542 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 PPWD1Q96BP3 646 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SARAFQ96BY9 339 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 CMTM7Q96FZ5 175 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 RBM18Q96H35 190 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SENP5Q96HI0 755 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SORBS1Q9BX66 1292 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 EXO5Q9H790 373 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 RPF2Q9H7B2 306 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SEMA4BQ9NPR2 832 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 MS4A12Q9NXJ0 267 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 GRHL1Q9NZI5 618 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 NUDT4Q9NZJ9 180 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 OPTCQ9UBM4 332 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 Q9UFV3 132 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 ATG4BQ9Y4P1 393 aa9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-210ENST00000493613 DOCK7Q96N67 2140 aa9.47□□□□□ -0.89
NUDCD3-210ENST00000493613 TRGV5A0A0B4J1U4 118 aa9.47□□□□□ -0.89
NUDCD3-210ENST00000493613 K7EPI3 171 aa9.47□□□□□ -0.89
NUDCD3-210ENST00000493613 UBXN8O00124 270 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms